Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_5024 |
Symbol | |
ID | 5705161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 5693580 |
End bp | 5695037 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641274417 |
Product | histidine kinase |
Protein accession | YP_001539758 |
Protein GI | 159040505 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.168004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0127409 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAGGC GCATGGACTT CCCCGCTCTG ATCACTGGCC TCACCGCAGT CCTCGAGATG ATCAACTCCG GTGACGCCGG CGTACCGGCG CTCATTCAGC TGCTCCGGGT GACCCAGCAG GCGCTGGGCG CATCCGGAAT GGCGTTCGTC GAGTTCGCGC CCACCGGCGG GCGGGTGATC GCCGCCACCG GCACCGCCGA ATGGACTGTC GGCCACCCCC TGCCAGCCGA CAATCCGGAC ACCGTCTGCC TGCTCTCCGG CCCCCGAGTC CACCAAGTCG AGACGGACTG CCTCACCGGC GGGCTCGGCG CGGAACTCTC CGGCCCGAGT CCGTCCCGGA TGGTGGTGTC CCGCGCCGAG CTCGGCGGAC TGACCGTGGG CAGCCTGCAC GCCCTCTTCC CCACCGACGA TGACCAGCCG TGCCCGGACC ACCAGCGCGT CGTCGCCTAC GTCGCCTCCT GCATCGCGCA CATGTACGGC GACCAGGACG GCCTACCGGT GCACGGCGAC GGGCCGGTCG TGGCCGCGCT GGCCGACGGC CTGGCCGTGG TGGACCGCGA CACCCACGTC AGGCTCTGGA ACCCGGCCGC CGCCCAGGTC ACCGGTCGTT CGGCCACCGA CGCACTCAGC CGGCCGTTGC CGTTCCCGCT GCCTCCTCCG GGGCAGGTGC TCGACCACCG GTTGCCGGAC GGTCGTTGGC TGCGGATCAC CTCGGGAGAG TTGCCGGGGC CGGGGACACT ACGCCTGGTC ACCTTCCGCG ACAACACCGA CCAGCAGCGC AGCGCCACCG AACGTGATCT CTTCGTCGCG GTCACCAGCC ACGAGCTGCG CACACCGGTG ACCGTGATCA AAGGGTACGC GGACACCCTC ACCGCGCACT GGGATTCACT GAACGACCTC GACCGGCGGA TGGCCGCCCA GAAGATCGGG CAACGCGCCA ACGAGTTGGC CCGGCTCGTC GACCGACTAC TCTCCTCCAC CGCCGAGGCG GGCCCGAGTG GGGAACCGCC GACCCCGTAC GACCTGGGTG ACGCCCTGCG GGCAGCGGTG ACCAACCTTC CCGTCGAACT GCGGCACCGG ATCACCCTGA CCGTGCCGGT CAGCCTGCCC AGGGCGCTCG GTCACCGGAA CAGCCTGGCG ACGGTGCTCA CCGAGTTGTG CACGAACGCC GGCAAGTACT CGCCTCCCGG CACCGCGATC ACGGTCACCG CCGGCGCGGA CGGACGAACC GTTTCCGTCC GGGTCGCCGA CCAGGGCATC GGCATCCGGC CGGAGCATGT GGAGCGGGCT TTCGACCGAT TCTGGCAGGG CGACTCCGGC GACCGCCGCC GCTTCCCCGG GGCCGGGCTC GGCCTCTTTC TCGTCCGCCG GATCGTCGAA CAGCAAAATG GATGGGTATC CCTCCGGCCG AAGGCCGGTG GCGGTACGGT CGCAGAGGTG CGGCTGCCCC ACGGGTGA
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Protein sequence | MPRRMDFPAL ITGLTAVLEM INSGDAGVPA LIQLLRVTQQ ALGASGMAFV EFAPTGGRVI AATGTAEWTV GHPLPADNPD TVCLLSGPRV HQVETDCLTG GLGAELSGPS PSRMVVSRAE LGGLTVGSLH ALFPTDDDQP CPDHQRVVAY VASCIAHMYG DQDGLPVHGD GPVVAALADG LAVVDRDTHV RLWNPAAAQV TGRSATDALS RPLPFPLPPP GQVLDHRLPD GRWLRITSGE LPGPGTLRLV TFRDNTDQQR SATERDLFVA VTSHELRTPV TVIKGYADTL TAHWDSLNDL DRRMAAQKIG QRANELARLV DRLLSSTAEA GPSGEPPTPY DLGDALRAAV TNLPVELRHR ITLTVPVSLP RALGHRNSLA TVLTELCTNA GKYSPPGTAI TVTAGADGRT VSVRVADQGI GIRPEHVERA FDRFWQGDSG DRRRFPGAGL GLFLVRRIVE QQNGWVSLRP KAGGGTVAEV RLPHG
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