Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4990 |
Symbol | |
ID | 5706139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5659437 |
End bp | 5660123 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641274383 |
Product | two component transcriptional regulator |
Protein accession | YP_001539724 |
Protein GI | 159040471 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.866601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000134834 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGATCGTCG ACGCGCCACA TCGCGGGCTC GTCCTCCTCG TCGAGGACGA AGCGACCATC GCCGACCTGG TCCGGCTCTA CCTGAACCGG GACGGTTTCG GCGTACATCT GGAGCGTGAC GGTGACGCCG GACTCGCCGC CGCCCGCCGA CTCCGACCGG TGGCCTGCGT GCTCGACATC GCGCTACCCG GCCTGCCCGG CACCGAGATC TGCCGCCGGC TACGCGAAGC GGGCGACTGG ACACCGGTCA TCTTCCTCAC CGCGCGCGAC GACGAGGTGG ACCGCGTCGT CGGGCTCGAG CTCGGCGCGG ACGACTACGT CACCAAACCG TTCAGCCCCC GTGAACTGGT GGCCCGGCTG CGGGCGGTGC TACGCCGCGT CGCCGGGCCC CCACCGGGCC AGCCGCGGAG GGTCGGTGTG GTCACGCTGG ACCCGGACCG CCGTACGGTG ACCGCGGCGG GTGATCCCGT GCAGCTGACC TCCACCGAGT TCGACCTGCT CGCCCACCTG ATGGCACGCC CCGGGCGGGT GTTCACCCGG GAGGAACTGC TCGCGGGTGT GTGGGGGTAC GCCGTCCCCG CCGGTACCCG CACCGCCGAC GTGCACGTGG CGCAGGTCCG GGCGAAGCTC GGCTCGGCGA GCGTGATCCG CACCCATCGG GGCGTGGGGT ACGCCGCCGA TGCGTGA
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Protein sequence | MIVDAPHRGL VLLVEDEATI ADLVRLYLNR DGFGVHLERD GDAGLAAARR LRPVACVLDI ALPGLPGTEI CRRLREAGDW TPVIFLTARD DEVDRVVGLE LGADDYVTKP FSPRELVARL RAVLRRVAGP PPGQPRRVGV VTLDPDRRTV TAAGDPVQLT STEFDLLAHL MARPGRVFTR EELLAGVWGY AVPAGTRTAD VHVAQVRAKL GSASVIRTHR GVGYAADA
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