| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4976 |
|---|
| Symbol | |
|---|
| ID | 5706188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 5647406 |
|---|
| End bp | 5647999 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641274371 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001539713 |
|---|
| Protein GI | 159040460 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00200112 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGTGGAGC GAGTGGATGT GCGAGTCGCG GGTGTGATCT TGGTTGATCC GCTGGGCCGG
TTGTTGTTGC AGCTCCGTGA CGGCAACACC CAGGTGGACC CACACCGTTG GTGCCTGCCC
GGTGGCCACG TTGATCCGGG TGAGGATCCG CTGACGGCCG CCCACCGAGA GTTGTACGAG
GAGACCGGCC TCAAGGTCGA GGAACTGCGC CTGTTCTGGC ACGGCAAGGC CCCTTCGGGG
CAGTTCCCCG GCGCGATCGG CGAGTTCTCG ACCTTCTACG CGCCCACCAG CGCCACGGAT
GAGGATGTGG TGTGCGGGGA GGGGGCGGCA ATGCGGTTCG TTGACGCGGC TGACGTGCCA
TCCCTGGAAT TCGGGCGGGC TAACGGGGAG ATCGTCCCGC GCTTTCTGGC CTCACCGCAA
TACCGGCAGT TGGTCGGGTC CATTGATCCA CATCTCGATC GGCGCACGGG AGTTCCAGTC
CAGCCCCTGG CCGATCGCTA TGTGGTCCAC ATGCGAGCTG TTCGACCAGT TGGCGGGGGT
GGTCCGTCAT GGGGGGCGGC GAGCTGTGCA GCCGGGGCAT ACCTTCGGAC CTGA
|
|---|
| Protein sequence | MVERVDVRVA GVILVDPLGR LLLQLRDGNT QVDPHRWCLP GGHVDPGEDP LTAAHRELYE
ETGLKVEELR LFWHGKAPSG QFPGAIGEFS TFYAPTSATD EDVVCGEGAA MRFVDAADVP
SLEFGRANGE IVPRFLASPQ YRQLVGSIDP HLDRRTGVPV QPLADRYVVH MRAVRPVGGG
GPSWGAASCA AGAYLRT
|
|---|
| |