Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4925 |
Symbol | |
ID | 5707069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5589013 |
End bp | 5589801 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641274318 |
Product | transposase |
Protein accession | YP_001539663 |
Protein GI | 159040410 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1484] DNA replication protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.164593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.337311 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCA AGACCAGCCG CAACGTCTCA TCGGAGATCG CGTTTCTCAC CCGCGCACTG AAGGCGCCGT CCCTGGCCGC GTCGGTGGAA CGCCTGGCGG AGCGGGCCCG AGCGGAGTCG TGGACGCATG AGGAGTTCCT CGCTGCCTGC CTGCAACGCG AAGTGGCTGC CCGGGAGTCT CATGGCGGAG AGGGACGCAT CCGGGCAGCC AAGTTCCCGG CCCGCAAGAG CCTGGAGGAG TTCGACTTCG ACCACCAGCG GTCCTTGAAG CGGGAGGCCA TCGCCCACCT GGGCACCCTC GACTTCATCA CCGGCCGGGA GAACGTGGTG TTCCTCGGCC CGCCGGGCAC CGGCAAGACC CACCTGTCCA TCGGCTTGGG CATCCGGGCC TGCCAGGCCG GACACCGGGT AGCGTTCGCC ACCGCCGCCC AGTGGGTGTC TCGCCTCGCT GACGCCCACC ACGCCGGCCG TCTGCAAGAC GAACTGGTCA AGCTCGGTCG GATCCCGCTG CTGATCGTCG ACGAGGTCGG CTACATCCCC TTCGAAGCCG AAGCGGCGAA CCTGTTCTTC CAGCTCGTCT CTAACCGCTA CGAACGAGCC TCGCTGATCG TCACCAGCAA CAAGCCCTTC GGCCGCTGGG GCGAAGTGTT CGGCGACGAC GTTGTCGCCG CAGCCATGAT CGACCGGCTC GTCCACCACG CCGAGGTCGT CTCGATGAAG GGCGACAGCT ACCGGCTCAA AGACCGCGAC CTCGGCCGCG TTCCTGCGGC CACCAAGACC AACGACTGA
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Protein sequence | MATKTSRNVS SEIAFLTRAL KAPSLAASVE RLAERARAES WTHEEFLAAC LQREVAARES HGGEGRIRAA KFPARKSLEE FDFDHQRSLK REAIAHLGTL DFITGRENVV FLGPPGTGKT HLSIGLGIRA CQAGHRVAFA TAAQWVSRLA DAHHAGRLQD ELVKLGRIPL LIVDEVGYIP FEAEAANLFF QLVSNRYERA SLIVTSNKPF GRWGEVFGDD VVAAAMIDRL VHHAEVVSMK GDSYRLKDRD LGRVPAATKT ND
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