| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4888 |
|---|
| Symbol | |
|---|
| ID | 5707540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 5543525 |
|---|
| End bp | 5544580 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641274283 |
|---|
| Product | methyltransferase type 12 |
|---|
| Protein accession | YP_001539628 |
|---|
| Protein GI | 159040375 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG5459] Predicted rRNA methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.687449 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGTGC CGTTGAGCCC GGAGGAGGCG CAGCAGTTCC ACGCCTCCGA CGCCGCCCCC
GCCGCGTTTC TCGACCTGCT CGACGCGGTC TCCTTCCGTA GCGTCGGAGC CGGGCTCCGG
TTGGGAGTCT TCGAGGCGCT GGCCAGCGGC CCGCTCCCTG TCGAACGGCT CGCCGCCCGT
ACCGGCACTG ACCCGCTCGG CCTGCGGATC CTCCTCGACG CGTTGACCAG CTTCGGTTAC
CTGGTCCGCG CCGACGGCCG GTACGCCAAC AGCGTCAACA CGACACGCTG GCTCCTGCGG
TCCGTACCGG ACAGTTTCGC GCCGGTGCTC GCCTTCTGGT CGGCGCTGCT CACCGGTTGG
TGGCACGACC TGGAGATGTC GATCCGCTCG GGCACTCCGA CCGGTGACTT CTACGCGTGG
CTGGAGGAAC GACCGGAGAC CCTGGCGGAC TTCCAGACCA TGTTGCGTCG CCTCGCCGAC
GGGCTCGGTG CGGAGATCGT CGAGCTGGTG CCGGTGCCGG CCGACGCGCG TAGCATGCTC
GACGTCGGTG GCGGACATGC GAGCTACCCG GTGGCCTTCC TCACCGCCCA CCCGCAGCTG
CGGGCCACCG TGGTGGACCT GGCTGGTGCG CTGATCCAGG GGGCGGAGAC CATCGCCGCC
GCAGGCCTGA CCGAACGGTG CACGTTGCGG GCGGGTGACC TCTTCGAGGT CGATTACGGC
ACCGGCCACG ATCTGGTGCT GCTGTTCAAC ATCGTCCACG GTTACCAGCC GGCCGAGACG
CTGACGCTGC TGCGCCGGGC CGCCGCCGCG TTGCGCCCTG GTGGCCGGGT GGCCCTGCTC
GAACCGCTGG CCGAGGCGCC GGAGCAGCCG GCTGGTCTCG GTGAGGCGTT TGTGCGGATG
TTCAGCCTGA ACCTGTTTCA CACCCAGGGG GGTCGGGCCT ACGGCCACGA CGAACTCGTT
GGGCTGCTGC GGGAGGCCGG CTTCACCGAC GTACGGCAGC AGGTGCTCAG TGGGTCGGAG
ACCGACCATC TGGTGACCGC GGTCCTGGCC ACTTGA
|
|---|
| Protein sequence | MPVPLSPEEA QQFHASDAAP AAFLDLLDAV SFRSVGAGLR LGVFEALASG PLPVERLAAR
TGTDPLGLRI LLDALTSFGY LVRADGRYAN SVNTTRWLLR SVPDSFAPVL AFWSALLTGW
WHDLEMSIRS GTPTGDFYAW LEERPETLAD FQTMLRRLAD GLGAEIVELV PVPADARSML
DVGGGHASYP VAFLTAHPQL RATVVDLAGA LIQGAETIAA AGLTERCTLR AGDLFEVDYG
TGHDLVLLFN IVHGYQPAET LTLLRRAAAA LRPGGRVALL EPLAEAPEQP AGLGEAFVRM
FSLNLFHTQG GRAYGHDELV GLLREAGFTD VRQQVLSGSE TDHLVTAVLA T
|
|---|
| |