Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4875 |
Symbol | |
ID | 5707567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5526395 |
End bp | 5527234 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641274271 |
Product | ABC transporter related |
Protein accession | YP_001539616 |
Protein GI | 159040363 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0328295 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGATC TCCACCGGGC AACCAGGCAG GTCCCAGAAC CCGCGATCCA GGTACGGGGC CTGCAGAAGT CATACCAGAA GCTGCGGGTG CTGCGCGGCG TCGACGTCGA CGTCGCGCGG GGCAGCGTCT TCGCCCTCCT CGGCTCCAAC GGGGCGGGCA AGACCACGGT GGTGCGGATC CTGTCCACGC TGCTCCGGCC GGATGCGGGA GCGGCCAGCG TCAACGGCTT CGACGTCGGC GCGGACGCGG CGAAGGTACG CGAGTCGATC AGCCTGACCG GGCAGTTCAC CGCGGTCGAC GAGGTCCTCA GCGGGCGGGA AAATCTTGTG CTGGTCGCCC GATTGCGGCG ACAGCGGGAG CCGGGTCGGG TCGCGGACGA CCTGCTGGCC CGCTTCGCCC TCACGGACGC GGCCAATCGG AGGGTGGCGA CCTATTCGGG TGGTATGCGT CGCCGCCTCG ACATCGCGAT GAGCCTGGTC GGGAATCCAC CGGTGATCTT CCTCGACGAA CCGACGGTGG GGCTGGACCC GCAGGCGCGG CTGGGGGTGT GGCAGGCCGT CCGGGAACTC GCAAGCCAGG GTACGACGGT ACTGCTCACC ACCCAGTACC TCGACGAGGC CGAGCAACTC GCGGACCGAA TCGCGGTCCT CCACGAGGGG CGCGTCGTCA CCAACGGCAC GCTCGCCGAA CTCCAGCGGC TGCTCCCGCC CGCCACCGTG GAGTACGTCG AAAAGCAGCC GTCCCTCGAG GACGTCTTCC TCGCCATCGT CGGCGGCGAG GGCACCGCCG TGCAGACACC ATCAGTCCCA CCGGAGCGAG CAGCCAGGGA CCCCCGATGA
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Protein sequence | MSDLHRATRQ VPEPAIQVRG LQKSYQKLRV LRGVDVDVAR GSVFALLGSN GAGKTTVVRI LSTLLRPDAG AASVNGFDVG ADAAKVRESI SLTGQFTAVD EVLSGRENLV LVARLRRQRE PGRVADDLLA RFALTDAANR RVATYSGGMR RRLDIAMSLV GNPPVIFLDE PTVGLDPQAR LGVWQAVREL ASQGTTVLLT TQYLDEAEQL ADRIAVLHEG RVVTNGTLAE LQRLLPPATV EYVEKQPSLE DVFLAIVGGE GTAVQTPSVP PERAARDPR
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