| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4860 |
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| Symbol | |
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| ID | 5707599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 5515666 |
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| End bp | 5516325 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641274256 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001539601 |
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| Protein GI | 159040348 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.452521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0798716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCACGC CGATTCGAGT CCTGGTCTGC GACGACCAGG CGCTGATCCG TACCGGCTTC
GCGACGATCA TCGACGCTCA GCCCGATCTC GAGGTGGTGG GCGAATGTGG GGACGGGCGA
GCGGCGGTCG GCCTCGCCGG CCGCCTGCAC CCGGACGTGG TGGTGATGGA CGTGCGGATG
CCGGTCCTCG ACGGCATCGG GGCGACCCGC CTGCTCGCCG GAGCCGGCGT GGCGAATCCC
GTTAAGGTGC TTGTGGTGAC GACGTTCAAC CTGGACGAGT ACGTGTACGA GGCGCTCCGG
GCGGGGGCGA GCGGCTTCCT GCTCAAGGAC GCGCCGCCGG CGCAACTGCT ACACGGAATC
CGGACCGTCG CCAGCGGCGC GGCGTTGCTG GCCCCCGAGG TGACCCGTCA GCTCGTGGGC
AGGTACGCCG CGCGGATCAG GCCCGCAGAG GACAGCTCGA GCGAGATTCC GCTGACGCCG
CGTGAACTGG AGGTACTTCG CCTCATCGCC GATGGTCTGT CCAACAGCGA GATCGCTGCC
ACACTGGTGA TCAGCCAGGA AACCGTGAAG ACCTACGTGT CGCGCATCCT CACCAAACTC
GACCTGCGCG ACCGCGTGCA GGCGGTGGTG TACGCCTACC GGAGTGGCCT GGTGACCTGA
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| Protein sequence | MTTPIRVLVC DDQALIRTGF ATIIDAQPDL EVVGECGDGR AAVGLAGRLH PDVVVMDVRM
PVLDGIGATR LLAGAGVANP VKVLVVTTFN LDEYVYEALR AGASGFLLKD APPAQLLHGI
RTVASGAALL APEVTRQLVG RYAARIRPAE DSSSEIPLTP RELEVLRLIA DGLSNSEIAA
TLVISQETVK TYVSRILTKL DLRDRVQAVV YAYRSGLVT
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