Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4774 |
Symbol | |
ID | 5704441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5402649 |
End bp | 5404070 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641274172 |
Product | hypothetical protein |
Protein accession | YP_001539518 |
Protein GI | 159040265 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0272932 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000356618 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGACCGGCC TGGCTCTCGC CACCATAGGT GTCGCCGCCC CGGCCGCGGA CGCGGTCGGA CGCCCGCTCA CCTCCGCCGA CGAGCAGCCC TCCGCCGACG AGCGCCGCAG CGGGGGTGAG CCCGGTAAGG GCGAGTCCGG CAAAGGTGAG TCCGGTAAGG GCGAGCCCGG CAAGGCCGAG TCCGGCAAGG GTGACCCTGG CAGAGGCGAG TCCGGCAGGG GCGAGTCCGA TCAGGGCAAG GGCAAGAAGG AGCCGAAGCC GAAGGGCGTT CCGGTCCCCT GTGACGCGGA CAAGCTGATC GCCGCGATCA CCCTGGCCAA CGCCCGCGGC GGCGCCGTGC TCGACCTCGC CAAGAAGTGC ACCTACCTGC TCACCGCCAC CATCGACGAC GGCGCCGGCC TGCCGGTTGT CACCGCCCCC ATCACCCTCA ACGGCGGCAA ACACACCACC ATCAAACGCG CCGCCGGGGT GGAGGAGTTC CGCATCGTCA CCGTCGGCAC CGGCGGTGAC CTCACCCTCA ACCACCTGAC AATCACGGGT GGACAGACTG ACGGCGATGG CGGAGGAATC CTGGTCAACG CCGGCGGAGC GTTGACCACC AACCACAGCA CCGTCACCCG CAACATCGCT GGCAGCGACG GCGGCGGAAG CAGCGGCGGT ATCGCCAACA ACGGCACCAC CACCATCAAA CACTCCGCCG TCAGCCGCAA CACTGCGGCA ACCGCCGCTG GAGGCATCGG AAACACCGGT CAACTCGCCA TCAAGAAATC CTCCGTCACC GCGAACATGG CCAACGCCGT CGTGGGCGGG TTCGGTGGAG GTGTCGGTAG CTTCCCCGGC GGCACCACGG TCGTGACTGG CAGCACCATC AGCGGTAACC ACGCCGGCGA CGCTGGTGGG GGTGCCGGCG GCTTCAACGC GAACGTCACC GTCACCGACA CCGCCATCAC CGGTAACAGA GCCAGCAACG GCGGCGCGGT CTTCGCGGAG GGGGGCATGC TGGCCCTACG CCACGTCACA GTCACCAACA ACACCGCCAC CCTTCAGGGC GGCGGCCTCA GCCTCCAAGC CCTCAACGCG GCGACCGTGG CAACCGTCGC GGACAGCACA ATCGCGCACA ACGTCGGCAG TCTGAACGGT GGAGGTATCG TCAACGCCGC GATCGCCTTC GCCTCCACAC TCGACGTGCG GAACACCCAC ATCACGGCCA ATCAGGCAAC ATTTGGTGGC GGAATCTTCA ACATCGCCGT TGACGCCACG GTCACGCTCA CCAACACGAA GGTCATCAAG AACATCGCCA TCAGTACTGG CGGGGGCATC CTCAACTCGG GCGGAACGGT GAACCTGAAC ACGGCCACCG GTACCGTCGT GGTCAAGAAC CGGCCAAACA ACTGCGTCAA CGTGCCCGGC TGCGTCGGAT AG
|
Protein sequence | MTGLALATIG VAAPAADAVG RPLTSADEQP SADERRSGGE PGKGESGKGE SGKGEPGKAE SGKGDPGRGE SGRGESDQGK GKKEPKPKGV PVPCDADKLI AAITLANARG GAVLDLAKKC TYLLTATIDD GAGLPVVTAP ITLNGGKHTT IKRAAGVEEF RIVTVGTGGD LTLNHLTITG GQTDGDGGGI LVNAGGALTT NHSTVTRNIA GSDGGGSSGG IANNGTTTIK HSAVSRNTAA TAAGGIGNTG QLAIKKSSVT ANMANAVVGG FGGGVGSFPG GTTVVTGSTI SGNHAGDAGG GAGGFNANVT VTDTAITGNR ASNGGAVFAE GGMLALRHVT VTNNTATLQG GGLSLQALNA ATVATVADST IAHNVGSLNG GGIVNAAIAF ASTLDVRNTH ITANQATFGG GIFNIAVDAT VTLTNTKVIK NIAISTGGGI LNSGGTVNLN TATGTVVVKN RPNNCVNVPG CVG
|
| |