| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4744 |
|---|
| Symbol | |
|---|
| ID | 5704569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 5368527 |
|---|
| End bp | 5370536 |
|---|
| Gene Length | 2010 bp |
|---|
| Protein Length | 669 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641274142 |
|---|
| Product | ATP-dependent metalloprotease FtsH |
|---|
| Protein accession | YP_001539488 |
|---|
| Protein GI | 159040235 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0465] ATP-dependent Zn proteases |
|---|
| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000616135 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGTA CGCGTTTCTT CCGCCGACCG GTGGTCTGGA TCATCCTGGT CATCCTCGGC
GCCGTTGTGC TCAGTCAGAT GTTCACCGGG GGCCCCGACT ACCACCGGGT GGACACTTCC
GTTGCGCTTG ACCAGCTCAA CAAGGGTGGC ATAAAGAAGG TCGTCTTCGC GGACAAGGAG
CAGACACTCC AGCTCGACCT GGCCGAGAAG ACCGATTTCG GGGACACGTC CACCGACCGG
ATCGAGGCGC AGTTCCCGTA CGAGGTCGGC GCCCAGGTCT GGAACGAGGT CCTCGACGCC
AAGGCGAACA ACCGCGTCAC CGGCCCGGCC GACACCGAGG TCTCGTCCGA CAGCATCTGG
GTGAGCCTGC TGGTCAATCT GCTCCCCATC GCCCTGTTGG TGCTACTGCT GCTGTTCTTC
ATGTCGCAGA TGCAGGGTGG CGGCTCGCGG GTGCTCAACT TCGGCAAGTC CAAGGCCAAG
ATGATCACCA AGGACACGCC GAAGACGACG TTCGCCGACG TGGCGGGGTC CGAGGAGGCC
GTCGAGGAGC TGCACGAGAT CAAGGACTTC CTGCAGAACC CGGCGAAGTA CCAGGCGCTC
GGCGCCAAGA TCCCGAAGGG TGTGCTGCTG TTCGGCCCGC CCGGAACCGG TAAGACCCTG
CTGGCCCGTG CGGTGGCCGG GGAGGCCGGG GTGCCCTTCT ACTCCATCTC CGGCTCGGAC
TTCGTCGAGA TGTTCGTCGG TGTCGGCGCC AGCCGGGTCC GTGACCTGTT CGAGCAGGCC
AAGACGAACG CGCCGGCGAT CGTCTTCGTG GACGAGATCG ACGCGGTCGG TCGCCACCGG
GGTGCCGGCA TGGGCGGCGG TCACGACGAG CGCGAGCAGA CTCTCAACCA GCTTCTCGTC
GAGATGGACG GCTTCGACAC CAAGGGCGGC GTCATCCTGA TCGCCGCCAC CAACCGGCCG
GACATCCTCG ACCCGGCGCT ACTGCGGCCG GGCCGCTTCG ACCGGCAGAT CCCGGTGGAC
GCGCCGGACA TGGAGGGCCG CAAGGCCATC CTGCGGGTGC ACGCCAAGGG TAAGCCGTTC
ACCCCTGACG TCGATCTCGA CGCGGTGGCG CGGCGGACCC CGGGCTTCAG CGGCGCCGAC
CTGGCCAACG TGATCAACGA GGCCGCGCTG CTCACGGCCC GCCGGGACAA GCGGGCGATC
ACCAACGACT CCCTGGAGGA GTCGATCGAC CGAGTGATCG CCGGCCCCCA GCGTCGTACC
CGGGTGATGA GCGACCAGGA GAAGAAGATC ACGGCGTACC ACGAGGGCGG GCACGCCCTG
GTGGCCTGGG CGTTGCCGCA CGCCGCTCCG GTGCACAAGG TGACGATCCT GTCCCGGGGG
CGGTCGCTGG GGCACACCCT GGTCCTGCCG ACCGAGGACA AGTACACCCA GACCCGGGCC
GAGATGGTGG ACACCCTGGC CTACGCACTG GGTGGCCGGG CAGCAGAGGA ACTGGTGTTC
CACGAGCCCA CCACCGGCGC CGGGAACGAC ATCGAGAAGG CCACCCAACT CGCCCGCGCA
ATGATCACCC AGTACGGCAT GAGCTCCAAG CTCGGTGCGA TCAAGTACGG CACCAGCGGT
GACGAGCCGT TCCTCGGCCG CAACATGGGC AATGAGCGGG GCTACTCCGA CGCTGTGGCC
GCCGAGATCG ACGCCGAGAT GCGGGCACTG ATCGAGCTGG CTCACGACGA GGCGTGGGAG
ATCCTGGTCG AGTACCGGGA TGTCCTGGAC AACATCGTGC TAGAGCTGAT GGAGAAGGAA
ACCCTCTCCA CGGCCGACAT GGCCCGCATC TGTGCCCGGG TGGCGAAGCG TCCGCCGATG
GCTCCGTACA ACGGGTTCGG CAAGCGCCAG CCCTCCACCG AACCGCCGGT TCGCACCCCG
GCCGAGAACG AGGCGCTCAA GGCGCAGGCC GAAGCCGATG GCGCGTCCGT CAGCGGTGCC
CCCTCGAACA ACTCGGACGG TCCGCACTGA
|
|---|
| Protein sequence | MERTRFFRRP VVWIILVILG AVVLSQMFTG GPDYHRVDTS VALDQLNKGG IKKVVFADKE
QTLQLDLAEK TDFGDTSTDR IEAQFPYEVG AQVWNEVLDA KANNRVTGPA DTEVSSDSIW
VSLLVNLLPI ALLVLLLLFF MSQMQGGGSR VLNFGKSKAK MITKDTPKTT FADVAGSEEA
VEELHEIKDF LQNPAKYQAL GAKIPKGVLL FGPPGTGKTL LARAVAGEAG VPFYSISGSD
FVEMFVGVGA SRVRDLFEQA KTNAPAIVFV DEIDAVGRHR GAGMGGGHDE REQTLNQLLV
EMDGFDTKGG VILIAATNRP DILDPALLRP GRFDRQIPVD APDMEGRKAI LRVHAKGKPF
TPDVDLDAVA RRTPGFSGAD LANVINEAAL LTARRDKRAI TNDSLEESID RVIAGPQRRT
RVMSDQEKKI TAYHEGGHAL VAWALPHAAP VHKVTILSRG RSLGHTLVLP TEDKYTQTRA
EMVDTLAYAL GGRAAEELVF HEPTTGAGND IEKATQLARA MITQYGMSSK LGAIKYGTSG
DEPFLGRNMG NERGYSDAVA AEIDAEMRAL IELAHDEAWE ILVEYRDVLD NIVLELMEKE
TLSTADMARI CARVAKRPPM APYNGFGKRQ PSTEPPVRTP AENEALKAQA EADGASVSGA
PSNNSDGPH
|
|---|
| |