Gene Sare_4660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4660 
Symbol 
ID5705717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5280679 
End bp5281407 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content77% 
IMG OID641274058 
ProductIclR family transcriptional regulator 
Protein accessionYP_001539404 
Protein GI159040151 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACACCA CCGCTCGACG CAGCGACCCA TCGGCCCGAA CCGGCGGGCC GGCCGCCGCG 
CGGGGCCGCG CCTCGGCCCG GGGCGAAGCC CAAACACCTG GCGGCGAGAG CGCGCAGACG
CTGGACCGAG GGTTGCGCCT GCTGCACCTG GTCGCCGACG CGCCGGGCGG GCTGACCGTC
ACCGAGGCGG CGGGCCGGCT GCGGATCGGT CGAGCCGCGG TCTACCGGCT GGTTGCGCCG
TTGAGTGCGC ACGGCCTGCT ACGTCGGGAC GCCGAAGGTC GGCTACGCCT CGGGATCGGC
GTGCTGCACC TGGCCCGCCG GGCCCAGCCG CTGCTCGCCG AGGGGGCACT GCCGGCGCTG
CGCCAACTCG CCGAGCAGAC CGGTGCGACC GCCCACCTGA CCGTGGTCGA GGGTGGTGAG
GGTGTCGCGC TGGCGGTGGT CGAGCCGAGT TGGACGGCGT TGCACGTGGC CTACCGGACC
GGCGCACGGC ATCCGTTGGA GCGTGGGGCG GCAGGGCGGG CCATTCTCGC TGGCCGGGCC
GGCGCGGCGG GGCCGGTGGA CACGGCCGGG GAGTTGCAGT CCGGAGCGCA CGGGGTGGCC
GCGCCCGTGC TGGGCGTACC CGGTCTGGAG GCGAGCGTCG GTGTGGTGTC CTTGGCGCCG
CTGGACACCG AGTCGATCGG CGCCCAGGTC CGCACGGCTG CCGTCGCCGT CGCCGACGCC
CTGCGCTGA
 
Protein sequence
MDTTARRSDP SARTGGPAAA RGRASARGEA QTPGGESAQT LDRGLRLLHL VADAPGGLTV 
TEAAGRLRIG RAAVYRLVAP LSAHGLLRRD AEGRLRLGIG VLHLARRAQP LLAEGALPAL
RQLAEQTGAT AHLTVVEGGE GVALAVVEPS WTALHVAYRT GARHPLERGA AGRAILAGRA
GAAGPVDTAG ELQSGAHGVA APVLGVPGLE ASVGVVSLAP LDTESIGAQV RTAAVAVADA
LR