| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4609 |
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| Symbol | |
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| ID | 5707671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 5230068 |
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| End bp | 5230907 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641274011 |
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| Product | MIP family channel protein |
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| Protein accession | YP_001539358 |
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| Protein GI | 159040105 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.344473 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGC GTGTGAGAGC GCCCGGACTC CTTGGCGAGT TGGCCGCCGA GTTCGCCGGC
ACCGCGATCC TGATTCTCTT CGGCGTGGGC GTCGTCGCCC AGGTCACTGC CGGTGGCACC
GGTGAGTTCG ACAGCATCGC CTGGGCCTGG GGCCTTGGCG TCGCGCTGGG CATCTACGTC
GCTGGCCGGA TCAGTGGCGC CCACCTCAAT CCGGCGGTGA CGCTCGCCCT CGCGGTGTTC
AAGGGCTTCT CGTGGCGCAA GGTGATGCCC TATGCCCTCG CACAGACCGC CGGGGCGTTC
GTCGCGGCCC TGATCATTCG CTGGAACTAC AGCGAGGTGC TGCAGCGGTT TGACCCGGGC
TTGACCAGCA AGAGCCAGGG CGTCTTCTCG ACCCTGCCGG GTGCTGGCAT CACCGAGTGG
GGCGCCCTGC GTGACCAGAT CATCGGCACG GCGATCCTGC TGTTTCTGAT CCTTGCCGTA
ACCGACGCCC GCAACTCTCT GCCCGGTGCC AACCTTGCCC CGCTGATCGT CGGCCTGATC
GTGGTCGCGA TTGGCATGGC GTTCGCCGTC AACGCCGGCT ACGCGATCAA CCCGGCCCGT
GACTTCGGCC CCCGCCTCGC GTCCTTCCTC ACCGGGTACG AGACGGCCTT CCTGGACCCG
AGCGGATATC CGTACTTTTG GGTGCCCATC GTCGGACCGC TGGTCGGTGG TGTCATCGGC
GCCGGCCTCT ATCAATTGTT CGTCGGCCGA TTCCTGCCGA GCGATGAGCC GCAGCCGGGC
GCGAACAGCG CCGAGACTGC GACCGAAACG GCTGCGATGT CCGAGCGCGC CCGCGTCTGA
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| Protein sequence | MTQRVRAPGL LGELAAEFAG TAILILFGVG VVAQVTAGGT GEFDSIAWAW GLGVALGIYV
AGRISGAHLN PAVTLALAVF KGFSWRKVMP YALAQTAGAF VAALIIRWNY SEVLQRFDPG
LTSKSQGVFS TLPGAGITEW GALRDQIIGT AILLFLILAV TDARNSLPGA NLAPLIVGLI
VVAIGMAFAV NAGYAINPAR DFGPRLASFL TGYETAFLDP SGYPYFWVPI VGPLVGGVIG
AGLYQLFVGR FLPSDEPQPG ANSAETATET AAMSERARV
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