| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4523 |
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| Symbol | |
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| ID | 5706013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 5110396 |
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| End bp | 5113935 |
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| Gene Length | 3540 bp |
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| Protein Length | 1179 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641273937 |
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| Product | GAF sensor hybrid histidine kinase |
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| Protein accession | YP_001539286 |
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| Protein GI | 159040033 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.522992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00180703 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACCACGG CGAAGCCGCC GGTTGCGGAG CTGTCCGCAC CGGACCCCGA GGCGGTCCTC
ATCGAGCTGA CCGAGGCGCT ACGGCGTGTT CGCCGCGGCG ATCTCAAGGT CCGGCTGCCC
CGCCGGCCAG GTCGGGCTGG CGAGGTCGCG GACGCCTTCA ACGACGTGGT GTCGCTCCAG
GAACGGCAGC ACCACGACCT GCGCCGGATC AGCCGGATCG TCGGCCAGGA CGGGCGGCTC
AACGAACGCC TCGACGGCGA GGGCCTGGAC GGTTCCTGGG CGGAGGGGCA GCGGGCGGTC
AACTCGCTCA TCGACGACCT CGGGCGCCCG ACCATCGAGA TCGCCCGAGT CATTGTCGCG
GTCGCCGAGG GCGACCTGTC GCAGCACATG GCGCTGAAGC TGGACGACCG ACCGCTGCGC
GGCGAGTACC TGGGCATCGG GCGCAGGGTG AACACGATGG TGGATCAGTT GTCGTCGTTC
GCGGATGAGG TGACCCGGGT GGCCCGGGAG GTGGGTACCG AGGGGAAGTT GGGTGGTCAG
GCCGATGTTC GGGGCGCCGC CGGCACCTGG AAGGACCTCA TCGACTCGGT GAACACCATG
GGGTCGAACC TGACCGCGCA GGTACGTAAC ATCTCGCAGG TTTCGACGGC GGTGGCGACG
GGTGATCTGG GTCAGAAGAT CACGGTGGAT GCGCAGGGCG AGATTCTGGA GTTGAAGAAC
ACCGTCAATA CGATGGTGGA TCAGTTGTCG TCGTTCGCGG ATGAGGTGAC CCGGGTCGCG
CGGGAGGTGG GTACCGAGGG GAAGTTGGGT GGTCAGGCCC AGGTGAAGGG TGTCTCCGGG
ACGTGGCGGG ACCTCACCGA GAACGTCAAC CAGCTGGCCG GCAACCTGAC CAGCCAGGTA
CGTAACATCT CGCAGGTTTC GACGGCGGTG GCGACGGGTG ATCTGGGTCA GAAGATCACG
GTGGATGCGC AGGGCGAGAT TCTGGAGTTG AAGAACACCG TCAACACGAT GGTGGATCAG
TTGTCGTCGT TCGCGGATGA GGTGACCCGG GTCGCGCGGG AGGTGGGTAC CGAGGGGAAG
TTGGGTGGTC AGGCCCAGGT GAAGGGTGTC TCCGGGACGT GGCGGGACCT CACCGACAAC
GTCAACTCGA TGGCGTCGAA TCTGACCTCG CAGGTGCGCA ACATCGCCTC GGTCACGACC
GCCGTCGCAC GGGGCGATCT GGGTCAGAAG ATCACGGTGG ATGCGCAGGG CGAGATTCTG
GAGTTGAAGA ACACCGTCAA TACGATGGTG GATCAGTTGT CGTCGTTCGC GGATGAGGTG
ACCCGGGTCG CGCGGGAGGT GGGTACCGAG GGGAAGTTGG GTGGTCAGGC CCAGGTGAGG
GGCGTCGCCG GGACGTGGCG GGACCTCACC GAGAACGTCA ACCAGCTCGC CTCCACCCTG
ACCGTGCAGT TACGCACCAT CGCCCAGGTC TCCACGTCGG TGACCCGCGG CGACCTGACC
CAGCGGATCG CGGTCGAGGC TCAGGGTGAG GTCGCCGAAC TGACGGACAA CATCAACCAG
ATGATCGTCA CCCTCCGAGA GACGACCGAG GAGAACGCCG AGCAGGGCTG GCTGGACTCC
AATCTGGCCC GCATCGGCGG GCTGCTCCAG GGCCAGCGGG ACCTCGGTGA GGTCTGCCGC
ATGATCATGA CGGAGGTCAC TCCGCTGGTT GACGCACAGC TCGGCGCGTT TTTCCTGGTG
GACGACTCCG AGGGCAGCGT CCGACTGCGG CTCGCCGCCT CGTATGGGTA CGTTGCCCGC
GGGCAGGACG TGACGTTCGG GCCCGGTGAG GGCCTGGTCG GCCAGACGGC GCTGTCCCGG
CGCACGATTC GGGTCAGCGG AGGGCCGGAC AACCCGCTCC GGCTCCGCTC CGGACTCGCC
GACACGGCAC CGGCCGACCT GGTGGTGCTG CCGGTCATCT TCGAGGGCGA ACTGCTCGGC
GTGATCGAGT TCGCCAGCAT GACGGCCCTC TCCGACCTCT ATCTCTCCTT CCTCGAGCGG
CTGGTCCTCA CCATCGGCGT CGCGGTCAAC ACCATCCAGG CGAACCGGCG TACCGAGGAA
CTGCTGTCCC AGTCGCAGCG GTTGGCCCAC GAGCTGCAGG AGCAGTCGGC CGAACTCCAG
CGCACGAACG CGGAACTGGA GGAGAAGGCG AAGCTGCTCT CCGAGCAGAA GGGCAACATC
GAGACCAAGA ACCGGGAGGT CGAGCTGGCC CGGCTCGGCC TGGAGGAGAC GGCGCAGCAG
CTCACCCGGG CCTCGGCCTA CAAGTCGGAG TTCCTGGCCA ACATGAGCCA CGAACTGCGT
ACGCCGCTGA ACTCGCTGCT CCTGCTGGCC CGACTGCTCG TCGAGAACCC GGAGCAGAAC
CTCAGCCCGA AACAGATCGA GTTCGCCCGG ACGATCCACA GCGCCGGAAC GGACCTGCTC
TCACTGATCG ACGACATCCT CGACCTGTCC AAGATCGAAG CGGGTCGGAT GGATGTCGAG
CCGACCGGGA TCAGGTTTAC CGAGATCCGT AGCTATGTCG AGCAGGCCTT CGTGCCGCAG
GCGCAGGAGA AGGGACTGGA CTTCGAGGTC CGGGTCAGCC CGGACCTGCC GGAGAAGATC
GTCACCGACG CGCAGCGGCT GCAGCAGATC CTGCGGAACC TGATCTCCAA CGCGGTCAAG
TTCACCGACG CTGGGGTGGT GCGACTGGCG ATCGCCCCGG CGCCGGAGTC GACTGTCTTC
GACGTGCCCG CCCTGACCAA CGCGCGGCAG GTGATCGCAT TCACCGTCGC TGACACCGGG
ATCGGTATCT CCGACGACAA GCTGTCGATC ATCTTCGAGG CGTTCCAGCA GGCCGACGGG
ACGACGAGCC GCCGGTACGG CGGGACCGGC CTGGGCCTGT CGATCAGTCG GGATCTGGCC
CGGCTGCTGG GCGGCGCGAT CGGCGTGTCC TCGGCACCCG GGCAGGGCTC GACCTTCACC
CTCTTCGTAC CCGATGTCCT GGCCCCGGAC GCGGTCGTGG GGCCGGCACC ACCCTCACCC
GCCCGGGCTG GTCTCCCGTC GTCGCTGCTG ATGCCCTCGG TGGAGCTGCT GCCCACCGCC
GCCGAGGCGG CGGCGACCCG CCAGCTGGCC GGCGCCACCG TGCTGATCGT GGACGACGAC
GTACGCACGG TCTTCGCCCT GACCAGCGCG TTGGAGCTGC ACGGGATGAC CGTGTTGTAC
GCGGACAACG GGGCTGACGG CGTCCGCCTG CTGGCCGAGC ATCCGGAGGC GGACATCGTA
TTGATGGACG CCATGATCCC CGATCAGGAC GGGTACGAGA CGACTCGGCA GATCCGGCGC
AACCATCGGT TCGCCGACCT CCCGATCGTC TTCCTGACCG CGAAGGCGAT GCCCGGTGAC
CGGGAGTCCG CGCTCGCGGC CGGAGGCAGC GACTACATCA CCAAGCCCGT TGACCTGGAC
GAGTTGATCG AGCTCATGAC GACCTGGATC AGCGGTGGCC GGAGCGAGGA GGGCCTGTGA
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| Protein sequence | MTTAKPPVAE LSAPDPEAVL IELTEALRRV RRGDLKVRLP RRPGRAGEVA DAFNDVVSLQ
ERQHHDLRRI SRIVGQDGRL NERLDGEGLD GSWAEGQRAV NSLIDDLGRP TIEIARVIVA
VAEGDLSQHM ALKLDDRPLR GEYLGIGRRV NTMVDQLSSF ADEVTRVARE VGTEGKLGGQ
ADVRGAAGTW KDLIDSVNTM GSNLTAQVRN ISQVSTAVAT GDLGQKITVD AQGEILELKN
TVNTMVDQLS SFADEVTRVA REVGTEGKLG GQAQVKGVSG TWRDLTENVN QLAGNLTSQV
RNISQVSTAV ATGDLGQKIT VDAQGEILEL KNTVNTMVDQ LSSFADEVTR VAREVGTEGK
LGGQAQVKGV SGTWRDLTDN VNSMASNLTS QVRNIASVTT AVARGDLGQK ITVDAQGEIL
ELKNTVNTMV DQLSSFADEV TRVAREVGTE GKLGGQAQVR GVAGTWRDLT ENVNQLASTL
TVQLRTIAQV STSVTRGDLT QRIAVEAQGE VAELTDNINQ MIVTLRETTE ENAEQGWLDS
NLARIGGLLQ GQRDLGEVCR MIMTEVTPLV DAQLGAFFLV DDSEGSVRLR LAASYGYVAR
GQDVTFGPGE GLVGQTALSR RTIRVSGGPD NPLRLRSGLA DTAPADLVVL PVIFEGELLG
VIEFASMTAL SDLYLSFLER LVLTIGVAVN TIQANRRTEE LLSQSQRLAH ELQEQSAELQ
RTNAELEEKA KLLSEQKGNI ETKNREVELA RLGLEETAQQ LTRASAYKSE FLANMSHELR
TPLNSLLLLA RLLVENPEQN LSPKQIEFAR TIHSAGTDLL SLIDDILDLS KIEAGRMDVE
PTGIRFTEIR SYVEQAFVPQ AQEKGLDFEV RVSPDLPEKI VTDAQRLQQI LRNLISNAVK
FTDAGVVRLA IAPAPESTVF DVPALTNARQ VIAFTVADTG IGISDDKLSI IFEAFQQADG
TTSRRYGGTG LGLSISRDLA RLLGGAIGVS SAPGQGSTFT LFVPDVLAPD AVVGPAPPSP
ARAGLPSSLL MPSVELLPTA AEAAATRQLA GATVLIVDDD VRTVFALTSA LELHGMTVLY
ADNGADGVRL LAEHPEADIV LMDAMIPDQD GYETTRQIRR NHRFADLPIV FLTAKAMPGD
RESALAAGGS DYITKPVDLD ELIELMTTWI SGGRSEEGL
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