| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4320 |
|---|
| Symbol | rpsL |
|---|
| ID | 5706882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 4883454 |
|---|
| End bp | 4883828 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641273739 |
|---|
| Product | 30S ribosomal protein S12 |
|---|
| Protein accession | YP_001539092 |
|---|
| Protein GI | 159039839 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0048] Ribosomal protein S12 |
|---|
| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00391297 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCCCACCA TTCAGCAGCT GGTCCGGAAG GGCCGCCAGG CCAAGACGAC CAAGACGAAG
ACCCCCGCAC TGAAGGGGTC GCCCCAGCGG CGGGGCGTGT GCACCCGTGT GTACACCACC
ACTCCGAAGA AGCCGAACTC GGCGCTGCGC AAGGTCGCTC GCGTCAAGCT CAGCAGCCAG
ATCGAGGTGA CCGCCTACAT CCCGGGTGTC GGCCACAACC TTCAGGAACA CTCGATCGTG
CTGGTCCGCG GCGGACGGGT GAAGGACCTC CCCGGCGTGC GATACAAGAT CGTCCGTGGC
TCGCTGGACA CCCAGGGTGT CCGCAACCGC AAGCAGGCGC GTAGCCGCTA CGGCGCGAAG
AAGGAGAAGA GCTGA
|
|---|
| Protein sequence | MPTIQQLVRK GRQAKTTKTK TPALKGSPQR RGVCTRVYTT TPKKPNSALR KVARVKLSSQ
IEVTAYIPGV GHNLQEHSIV LVRGGRVKDL PGVRYKIVRG SLDTQGVRNR KQARSRYGAK
KEKS
|
|---|
| |