| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4316 |
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| Symbol | rpsJ |
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| ID | 5706878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 4878741 |
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| End bp | 4879049 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641273735 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_001539088 |
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| Protein GI | 159039835 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00318544 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCGGGAC AGAAGATCCG CATCCGGCTC AAGGCCTATG ACCACGAGGT CGTCGACTCC
TCGGCTCGGA AGATCGTCGA GACGGTGACG CGCACCGGGG CGCAGGTCGC AGGCCCGGTG
CCGCTGCCCA CGGAGATCAA CCGTTTCTGC GTTATCCGCT CGCCGCACAA GTACAAGGAC
TCGCGCGAGC ACTTCGAGAT GCGCACGCAC AAGCGGCTGA TCGACATCAT CGACCCGACC
CCGAAGACGG TCGACTCGCT CATGCGCCTC GACCTGCCGG CTGGCGTCGA CATCGAGATC
AAGCTGTAG
|
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| Protein sequence | MAGQKIRIRL KAYDHEVVDS SARKIVETVT RTGAQVAGPV PLPTEINRFC VIRSPHKYKD
SREHFEMRTH KRLIDIIDPT PKTVDSLMRL DLPAGVDIEI KL
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