| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4315 |
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| Symbol | rplC |
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| ID | 5706877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 4878070 |
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| End bp | 4878729 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641273734 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_001539087 |
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| Protein GI | 159039834 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00341518 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACAGGC AAGTCAAGGG GATCCTGGGC GCGAAGCTCG GCATGACCCA GGTCTGGGAC
AACAACCGTG TTGTCCCGGT GACCGTGGTG CAGGCCGGCC CGTGCGTCGT CAGCCAGGTC
CGTAGCCACC AGAAGGATGG CTACGCGGCG GTCCAGCTGG CATATGGCGC CATCGACCCG
CGCAAGGTCA AGAAGCCGAT CAGTGGTCAC TACACCAAGG CCGACGTGGC TCCGCGCCGC
CACATCGTCG AGCTGCGGAC GACCGACGCC GCCGAGTACT CGCTCGGTCA GGAGGTCACG
GTCGAGCAGT TCCCGGCCGG TATCTCGGTC GACGTGACCG GAAAGACCAA GGGCAAGGGC
TACGCCGGCC CGATGAAGCG GCATGGCTTC CACGGCCTGC GCGCCAGCCA CGGTGTGGAG
CGCAAGCACC GCTCGCCGGG CTCGATTGGC GGCTGTGCCA CTCCGGGCCG GGTCTTCAAG
GGCACCCGGA TGGCCGGCCG GATGGGTGGT GTGCGCTACA CCGTCCAGAA CCTGACCGTC
CAAGCGGTCG ACACCGAGAA CAATCTCCTG CTCGTCCGGG GTGCCATCCC CGGTCCCAAG
GGCGCACTGG TCCTGGTCCG CACCGCGGCC AAGGCGAAGA AGGGCGGTGC GGCCAAGTGA
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| Protein sequence | MDRQVKGILG AKLGMTQVWD NNRVVPVTVV QAGPCVVSQV RSHQKDGYAA VQLAYGAIDP
RKVKKPISGH YTKADVAPRR HIVELRTTDA AEYSLGQEVT VEQFPAGISV DVTGKTKGKG
YAGPMKRHGF HGLRASHGVE RKHRSPGSIG GCATPGRVFK GTRMAGRMGG VRYTVQNLTV
QAVDTENNLL LVRGAIPGPK GALVLVRTAA KAKKGGAAK
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