| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4300 |
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| Symbol | rplF |
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| ID | 5704903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 4871076 |
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| End bp | 4871618 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641273719 |
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| Product | 50S ribosomal protein L6 |
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| Protein accession | YP_001539072 |
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| Protein GI | 159039819 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0097] Ribosomal protein L6P/L9E |
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| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.118959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00370364 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCGCGTA TTGGACGTAA GTCGATCCCG GTGCCAGCCG GCGTCGACGT CACGATCGAC
GGCCAGACCG TCAAGGTCAA GGGCCCCAAG GGCGAACTCT CGCACACCCT TGCCGAGCCG
ATCACGGTCG AGCGGGCGGA GGACGGGCAG CTGAACGTGG CCCGCCCGAA CGACGAGCGC
AAGGCCAAGG AGCTACACGG CCTGAGCCGT ACCCTGGTCG CCAACATGAT CGTCGGGGTC
ACCGAGGGTT ACCGTAAGAG CCTGGAGATC GCGGGTACCG GCTACCGGGT CACCGCGAAG
GGCAAGGACC TCGAGTTCGC ACTCGGGTTC TCGCACCCGG TCACGGTGGT GGCGCCGGAA
GGCATCACCT TCTCGGTGGA GAAGCCGACG CTGTTCCACG TGGCTGGCAT CAACAAGCAG
CTGGTCGGTG AGGTCGCCGC GAACATCCGG AAGATCCGGC CGCCGGAGCC CTACAAGGGC
AAGGGCGTGA AGTACCAGGG TGAAGTGATC CGCCGTAAGG CCGGAAAGGC AGGTAAGAAG
TGA
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| Protein sequence | MSRIGRKSIP VPAGVDVTID GQTVKVKGPK GELSHTLAEP ITVERAEDGQ LNVARPNDER
KAKELHGLSR TLVANMIVGV TEGYRKSLEI AGTGYRVTAK GKDLEFALGF SHPVTVVAPE
GITFSVEKPT LFHVAGINKQ LVGEVAANIR KIRPPEPYKG KGVKYQGEVI RRKAGKAGKK
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