Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4297 |
Symbol | rpmD |
ID | 5704900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4869859 |
End bp | 4870041 |
Gene Length | 183 bp |
Protein Length | 60 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641273716 |
Product | 50S ribosomal protein L30 |
Protein accession | YP_001539069 |
Protein GI | 159039816 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00294158 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTCGCC TGAAGGTCAC CCAGGTTCGA TCCGAGATCG GGACCAAGCG GAACCAGCGG GACTCGCTGC GGTCGCTCGG TCTCAAGCGG ATCAACGACG TGGTGGTCAA GGAGGACCGT CCGGAGATTC GCGGCATGAT CTTCACGGTC AACCACCTCG TGAAGGTCGA GGAGGTCGAG TAA
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Protein sequence | MARLKVTQVR SEIGTKRNQR DSLRSLGLKR INDVVVKEDR PEIRGMIFTV NHLVKVEEVE
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