Gene Sare_4260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4260 
Symbol 
ID5704392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4834083 
End bp4836596 
Gene Length2514 bp 
Protein Length837 aa 
Translation table11 
GC content72% 
IMG OID641273679 
Productnitrite reductase (NAD(P)H), large subunit 
Protein accessionYP_001539032 
Protein GI159039779 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID[TIGR02374] nitrite reductase [NAD(P)H], large subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00961758 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00370364 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTCGCG GCAGACTGGT CGTCGTCGGC AACGGCATGG TCGGGCAACG GTTCGTGGAC 
GCGTTGCGCG CCCGCGACGC CGACGGTCAC TGGCAGGTGA CGGTACTCGG CGAGGAGTCC
CGGCCCGCAT ACGACCGGGT ACGCCTCTCC GCGTTCTTCG ACGGCGTGGG TGTGGACGAA
CTCAACCTGC ACACCCCGGA CGAGGGGGTG CGGCTACGGC TCGGTGAGCC GGTCCGCACG
GTCGACCGGG CCAGGCGGGT GGTGGCGACA ACCGCCGGCG AGTACCCGTA CGACGCGCTG
GTGTTGGCCA CCGGCTCGTC CCCCTTCGTG CCGCCGATCG AAGGCGGCGA CCTGCCGGGG
GTGTTCGTCT ACCGCACCCT CGACGACCTG GCCGCGATCC GCGCGTACGC CCAGGGCCGT
CGGAGGGGCG CGGTGATCGG CGGCGGGCTG CTCGGCCTGG AGGCGGCGAA CGCGCTGCGG
CTGCTCGGAC TCACCACCAG CGTCGTGGAG TTCGCGCCGC GCCTGATGCC GGTGCAGCTG
GACACCGCCG GCGCCGCGCT GCTCCGCCGC TACGTCGAGG ACCTCGGCGT GACCTGCCAC
CTGGGGGCGG CCACCAGCGC GTTGCACCCT GGCCCGGACG GCTCGGTGGC CGGGTTGGTA
CTGGCCGACG GCACCCGGGT CGACGCCGAC CTGGTTGTCG TGGCGGCCGG CATCCGGCCC
CGGGACCAGC TGGCCCGCGC CGCCGACCTT CCTCTCGGCC CCCGGGGCGG GGTGCTGGTC
GACCGCACCT GCCGAAGTAC CGACGAGCGA ATCTGGGCGG TTGGCGAATG CGCCGCCGTC
GACGGCACCT GCCACGGCCT GGTCGCCCCC GGGTACGCGA TGGCGGAGAC GGTGGCCGAC
CGGCTGGTCG GCGGCGGGGC CACCGTCCCC GACGCGGACA CCGCCACCAA GTTGAAGCTG
CTCGGCGTGG ACGTCGCCTC GTTCGGTGAC GCGCACGGCA CCACCGCGGG CAGCCTCAAC
GTGACCTTCA TCGATCCGGC CACCCGGGTG TACGCCAAGC TGGTCCTCTC CGACGACGCG
CGGACGTTGC TCGGCGGCAT CCTGGTCGGC GACGCGGGCG CGTACCCGAC GTTGCGGGCC
AGCGTCGGTG GGACGCTGCC CGCTCCCCCA CTCTCGCTGC TCAATCCGGC TGGCGCGGGC
AGCGGGGCGG CGGCGCTTCC CGCTTCCGCA CAGGTCTGTT CCTGCAATGC GGTCACTCGC
GCCGACCTGG ACCACGCGAT CGCCGACGGC GCGGCCGACG TGCCAGCGCT CAAGGCGTGT
ACCCGAGCCG GCACCAGCTG CGGTTCCTGC GTACCGATGC TCCGGCAGCT ACTCGAAGCC
GCCGGGGTCG GGCAGTCCAG CGCACTCTGT GAACACTTCG AGGCGAGCCG CCAGGAGCTG
TTCGACATCG TCCGGGTCCG TGGCATCCGC ACCTTCTCCA CCTTGATCGC CGAGCACGGC
CGGGGACACG GCTGCGACAT CTGTAAGCCG GTGGTGGCGT CGATCCTGGC TTCCCTCGGC
ACCGGCCACG TCCTCGACGG CGAACAGGCG TCACTGCAGG ACACCAACGA CCACTTCCTG
GCCAACCTGC AACGGGACGG CAGCTACTCG GTGGTGCCCA GGATCCCCGG TGGCGAGATC
ACCCCGGAGA AGCTGATCGT GCTCGGCGAG GTGGCCCGGG ACTTCGAGCT CTACACGAAG
ATCACCGGAG GGCAGCGCAT CGATCTGCTC GGCGCGCGGG TCGAACAGTT GCCACAGATC
TGGCGCCGGC TGGTCGACGC GGGCTTCGAG TCCGGCCACG CCTACGGCAA GGCACTGCGG
ACGGTCAAAT CGTGCGTCGG GTCGACCTGG TGCCGGTACG GGGTACAGGA CTCGGTCGGG
CTGGCCATCG CGCTGGAGCT GCGCTACCGA GGACTCCGCG CCCCGCACAA GATCAAGGCA
GCGGTCTCCG GCTGTGCCCG AGAGTGCGCC GAGGCCCGCG GCAAGGACTT CGGTGTCATC
GCCACCGACA GCGGCTGGAA TCTCTACGTC GGTGGGAACG GCGGCTTCCG ACCTCGGCAC
GCCGACCTGT TCGCCACCGA CCTGCCCACC GAGGCGCTGG TGCGGCTGGT CGACCGGTTC
CTGATGTACT ACATCCGCAC CGCGGACCGG CTGCAGCGCA CCGCCGCCTG GATCGAGGCG
ATGGACGGCG GCCTGGAGCA CCTCCGCGCG GTCATCGTGG ACGACTCGCT CGGGCTCTGT
GCTGAGCTGG ACGCGGCGAT GGCCCGACAC GTGGCGTCGT ACTCCGACGA GTGGCGCGAT
GTCCTCCGGG ATCCGACCCG GCTGGGTCGG TTCACCTCGT TCGTCAACGC GCCCGAGGTT
CCCGACCCGT CGATCCGGTT CACTGAGGAA CGCGGCCAAC GGGTGCCCTG CCGGGCCGGG
ACCACCGACG ACCGACAGCC GGTCGGGCTG GGGATGCCGG AGGTGCGGCG ATGA
 
Protein sequence
MSRGRLVVVG NGMVGQRFVD ALRARDADGH WQVTVLGEES RPAYDRVRLS AFFDGVGVDE 
LNLHTPDEGV RLRLGEPVRT VDRARRVVAT TAGEYPYDAL VLATGSSPFV PPIEGGDLPG
VFVYRTLDDL AAIRAYAQGR RRGAVIGGGL LGLEAANALR LLGLTTSVVE FAPRLMPVQL
DTAGAALLRR YVEDLGVTCH LGAATSALHP GPDGSVAGLV LADGTRVDAD LVVVAAGIRP
RDQLARAADL PLGPRGGVLV DRTCRSTDER IWAVGECAAV DGTCHGLVAP GYAMAETVAD
RLVGGGATVP DADTATKLKL LGVDVASFGD AHGTTAGSLN VTFIDPATRV YAKLVLSDDA
RTLLGGILVG DAGAYPTLRA SVGGTLPAPP LSLLNPAGAG SGAAALPASA QVCSCNAVTR
ADLDHAIADG AADVPALKAC TRAGTSCGSC VPMLRQLLEA AGVGQSSALC EHFEASRQEL
FDIVRVRGIR TFSTLIAEHG RGHGCDICKP VVASILASLG TGHVLDGEQA SLQDTNDHFL
ANLQRDGSYS VVPRIPGGEI TPEKLIVLGE VARDFELYTK ITGGQRIDLL GARVEQLPQI
WRRLVDAGFE SGHAYGKALR TVKSCVGSTW CRYGVQDSVG LAIALELRYR GLRAPHKIKA
AVSGCARECA EARGKDFGVI ATDSGWNLYV GGNGGFRPRH ADLFATDLPT EALVRLVDRF
LMYYIRTADR LQRTAAWIEA MDGGLEHLRA VIVDDSLGLC AELDAAMARH VASYSDEWRD
VLRDPTRLGR FTSFVNAPEV PDPSIRFTEE RGQRVPCRAG TTDDRQPVGL GMPEVRR