Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4260 |
Symbol | |
ID | 5704392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 4834083 |
End bp | 4836596 |
Gene Length | 2514 bp |
Protein Length | 837 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641273679 |
Product | nitrite reductase (NAD(P)H), large subunit |
Protein accession | YP_001539032 |
Protein GI | 159039779 |
COG category | [C] Energy production and conversion |
COG ID | [COG1251] NAD(P)H-nitrite reductase |
TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00961758 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00370364 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTCGCG GCAGACTGGT CGTCGTCGGC AACGGCATGG TCGGGCAACG GTTCGTGGAC GCGTTGCGCG CCCGCGACGC CGACGGTCAC TGGCAGGTGA CGGTACTCGG CGAGGAGTCC CGGCCCGCAT ACGACCGGGT ACGCCTCTCC GCGTTCTTCG ACGGCGTGGG TGTGGACGAA CTCAACCTGC ACACCCCGGA CGAGGGGGTG CGGCTACGGC TCGGTGAGCC GGTCCGCACG GTCGACCGGG CCAGGCGGGT GGTGGCGACA ACCGCCGGCG AGTACCCGTA CGACGCGCTG GTGTTGGCCA CCGGCTCGTC CCCCTTCGTG CCGCCGATCG AAGGCGGCGA CCTGCCGGGG GTGTTCGTCT ACCGCACCCT CGACGACCTG GCCGCGATCC GCGCGTACGC CCAGGGCCGT CGGAGGGGCG CGGTGATCGG CGGCGGGCTG CTCGGCCTGG AGGCGGCGAA CGCGCTGCGG CTGCTCGGAC TCACCACCAG CGTCGTGGAG TTCGCGCCGC GCCTGATGCC GGTGCAGCTG GACACCGCCG GCGCCGCGCT GCTCCGCCGC TACGTCGAGG ACCTCGGCGT GACCTGCCAC CTGGGGGCGG CCACCAGCGC GTTGCACCCT GGCCCGGACG GCTCGGTGGC CGGGTTGGTA CTGGCCGACG GCACCCGGGT CGACGCCGAC CTGGTTGTCG TGGCGGCCGG CATCCGGCCC CGGGACCAGC TGGCCCGCGC CGCCGACCTT CCTCTCGGCC CCCGGGGCGG GGTGCTGGTC GACCGCACCT GCCGAAGTAC CGACGAGCGA ATCTGGGCGG TTGGCGAATG CGCCGCCGTC GACGGCACCT GCCACGGCCT GGTCGCCCCC GGGTACGCGA TGGCGGAGAC GGTGGCCGAC CGGCTGGTCG GCGGCGGGGC CACCGTCCCC GACGCGGACA CCGCCACCAA GTTGAAGCTG CTCGGCGTGG ACGTCGCCTC GTTCGGTGAC GCGCACGGCA CCACCGCGGG CAGCCTCAAC GTGACCTTCA TCGATCCGGC CACCCGGGTG TACGCCAAGC TGGTCCTCTC CGACGACGCG CGGACGTTGC TCGGCGGCAT CCTGGTCGGC GACGCGGGCG CGTACCCGAC GTTGCGGGCC AGCGTCGGTG GGACGCTGCC CGCTCCCCCA CTCTCGCTGC TCAATCCGGC TGGCGCGGGC AGCGGGGCGG CGGCGCTTCC CGCTTCCGCA CAGGTCTGTT CCTGCAATGC GGTCACTCGC GCCGACCTGG ACCACGCGAT CGCCGACGGC GCGGCCGACG TGCCAGCGCT CAAGGCGTGT ACCCGAGCCG GCACCAGCTG CGGTTCCTGC GTACCGATGC TCCGGCAGCT ACTCGAAGCC GCCGGGGTCG GGCAGTCCAG CGCACTCTGT GAACACTTCG AGGCGAGCCG CCAGGAGCTG TTCGACATCG TCCGGGTCCG TGGCATCCGC ACCTTCTCCA CCTTGATCGC CGAGCACGGC CGGGGACACG GCTGCGACAT CTGTAAGCCG GTGGTGGCGT CGATCCTGGC TTCCCTCGGC ACCGGCCACG TCCTCGACGG CGAACAGGCG TCACTGCAGG ACACCAACGA CCACTTCCTG GCCAACCTGC AACGGGACGG CAGCTACTCG GTGGTGCCCA GGATCCCCGG TGGCGAGATC ACCCCGGAGA AGCTGATCGT GCTCGGCGAG GTGGCCCGGG ACTTCGAGCT CTACACGAAG ATCACCGGAG GGCAGCGCAT CGATCTGCTC GGCGCGCGGG TCGAACAGTT GCCACAGATC TGGCGCCGGC TGGTCGACGC GGGCTTCGAG TCCGGCCACG CCTACGGCAA GGCACTGCGG ACGGTCAAAT CGTGCGTCGG GTCGACCTGG TGCCGGTACG GGGTACAGGA CTCGGTCGGG CTGGCCATCG CGCTGGAGCT GCGCTACCGA GGACTCCGCG CCCCGCACAA GATCAAGGCA GCGGTCTCCG GCTGTGCCCG AGAGTGCGCC GAGGCCCGCG GCAAGGACTT CGGTGTCATC GCCACCGACA GCGGCTGGAA TCTCTACGTC GGTGGGAACG GCGGCTTCCG ACCTCGGCAC GCCGACCTGT TCGCCACCGA CCTGCCCACC GAGGCGCTGG TGCGGCTGGT CGACCGGTTC CTGATGTACT ACATCCGCAC CGCGGACCGG CTGCAGCGCA CCGCCGCCTG GATCGAGGCG ATGGACGGCG GCCTGGAGCA CCTCCGCGCG GTCATCGTGG ACGACTCGCT CGGGCTCTGT GCTGAGCTGG ACGCGGCGAT GGCCCGACAC GTGGCGTCGT ACTCCGACGA GTGGCGCGAT GTCCTCCGGG ATCCGACCCG GCTGGGTCGG TTCACCTCGT TCGTCAACGC GCCCGAGGTT CCCGACCCGT CGATCCGGTT CACTGAGGAA CGCGGCCAAC GGGTGCCCTG CCGGGCCGGG ACCACCGACG ACCGACAGCC GGTCGGGCTG GGGATGCCGG AGGTGCGGCG ATGA
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Protein sequence | MSRGRLVVVG NGMVGQRFVD ALRARDADGH WQVTVLGEES RPAYDRVRLS AFFDGVGVDE LNLHTPDEGV RLRLGEPVRT VDRARRVVAT TAGEYPYDAL VLATGSSPFV PPIEGGDLPG VFVYRTLDDL AAIRAYAQGR RRGAVIGGGL LGLEAANALR LLGLTTSVVE FAPRLMPVQL DTAGAALLRR YVEDLGVTCH LGAATSALHP GPDGSVAGLV LADGTRVDAD LVVVAAGIRP RDQLARAADL PLGPRGGVLV DRTCRSTDER IWAVGECAAV DGTCHGLVAP GYAMAETVAD RLVGGGATVP DADTATKLKL LGVDVASFGD AHGTTAGSLN VTFIDPATRV YAKLVLSDDA RTLLGGILVG DAGAYPTLRA SVGGTLPAPP LSLLNPAGAG SGAAALPASA QVCSCNAVTR ADLDHAIADG AADVPALKAC TRAGTSCGSC VPMLRQLLEA AGVGQSSALC EHFEASRQEL FDIVRVRGIR TFSTLIAEHG RGHGCDICKP VVASILASLG TGHVLDGEQA SLQDTNDHFL ANLQRDGSYS VVPRIPGGEI TPEKLIVLGE VARDFELYTK ITGGQRIDLL GARVEQLPQI WRRLVDAGFE SGHAYGKALR TVKSCVGSTW CRYGVQDSVG LAIALELRYR GLRAPHKIKA AVSGCARECA EARGKDFGVI ATDSGWNLYV GGNGGFRPRH ADLFATDLPT EALVRLVDRF LMYYIRTADR LQRTAAWIEA MDGGLEHLRA VIVDDSLGLC AELDAAMARH VASYSDEWRD VLRDPTRLGR FTSFVNAPEV PDPSIRFTEE RGQRVPCRAG TTDDRQPVGL GMPEVRR
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