| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4221 |
|---|
| Symbol | |
|---|
| ID | 5707959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 4791483 |
|---|
| End bp | 4792430 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641273640 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001538993 |
|---|
| Protein GI | 159039740 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.292609 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0178702 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCTCA TGCTGGAGCC GCTTCGTAGG ATTGCGGCGT ACGCGGTTTG TACTAATTCG
GTCAGTCAGA TTCTGCTGGT CCGCGCATCG CAGCGCTCCG GTACACCCGG TACATGGTCG
CTGCCCGGGG GCGCGGTCGA CCACGGCGAA GACCCGTGCG ACACGGTGGT CCGGGAGACC
GCTGCCGAGA CCGGGCTGTC GGTCAGTGTC GCCACCCTCA CCGACGTGCT CGCCGACATG
CGGGCGTTGC CCGAACGGGG CATCACCATC CACACCGACC GCCTGCTCTA CCGGGTGTCG
GTGCGGGGCG GGACGCTGAC CGAACGAGTC GACCAGCCCA CCGACCTGGC TCGCTGGTTC
ACTCTGGAAC AGGCCCGGGA GCTGCCGTTG CGTTCGTTCA CGGCGCGGGC CCTCGGCCTG
TCCACCTCCT CGGCGGACAT GGTGCCGGAC GAGCCTCCCG AGTTCCCGTC CTTCTACGCC
GTCGAGGGGC CGGACGGCCT GCACCGGGCG CAGCGCTTCG CCGCATATGC GGTCGTCACC
GATCCGGACG ACCGGGTGCT GCTCACCCGG GTCTCCGACG GGTACCCGGG CGCCGGCTGC
TGGCACCTGC CAGGCGGCGG GACGGACTAC GGTGAGCAGC CGGGCGCAGC CCTGATCCGT
GAGCTGGTCG AGGAGACCGG GCAGACCGGG CGGCTGGTCG AGCTGCTCGG CGTGGCGAGC
CACCGCGACG CCGCCTCGCT CGGTCCGGAG GGTTACCCGA TCGACTGGCA CGGTGTCCGC
GCCTTCTACC GGGTCGTGGT CGACCAGCCC GCTCCGCCGA CCGTCACCGA CATCGGGGGG
TCCACCTGTG AGGCCCGCTG GTTCGCGAAG GAGGAGCTGG GTGCCCTCCC GGCCCATCGG
CTGACCGAGG TGACGGCGGA GGCGGTCCAG GCCGCCCGCC TGACCTGA
|
|---|
| Protein sequence | MTLMLEPLRR IAAYAVCTNS VSQILLVRAS QRSGTPGTWS LPGGAVDHGE DPCDTVVRET
AAETGLSVSV ATLTDVLADM RALPERGITI HTDRLLYRVS VRGGTLTERV DQPTDLARWF
TLEQARELPL RSFTARALGL STSSADMVPD EPPEFPSFYA VEGPDGLHRA QRFAAYAVVT
DPDDRVLLTR VSDGYPGAGC WHLPGGGTDY GEQPGAALIR ELVEETGQTG RLVELLGVAS
HRDAASLGPE GYPIDWHGVR AFYRVVVDQP APPTVTDIGG STCEARWFAK EELGALPAHR
LTEVTAEAVQ AARLT
|
|---|
| |