Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4192 |
Symbol | |
ID | 5703846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4761663 |
End bp | 4762556 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641273613 |
Product | transposase IS204/IS1001/IS1096/IS1165 family protein |
Protein accession | YP_001538966 |
Protein GI | 159039713 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3464] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00204807 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTGTTCT CGGGGCTGTC CCCGCTGGTC ATCGAGGATG TGACCGACGA GGGTGAGCGG ATCGTGGTGC TGGCCCGCAC GCCCCGGGAC GCTGCGATCT GCCCGATATG CGGGGCCTCG TCCGGACGGG TGCACGGCTA TCACTGGCGG ACGGTCGCGG ACGTTGCGGT CGACGGGCGG CGGGTGGTGG TCCGGGTGCG GGTGCGGGTG CGGCGTCTGG TGTGTCCCAC GCGCGGCTGC CGCCATACCT TCCGGGAACA GGTTCCCGGG GTGCTGGAGC GATACCAGCG CCGCACGGCT CGTTTGAACA GGCAGGTCAA AGCCGTGGTC AAGGAGTTGG CGGGCCGGGC AGGGTCGCGT CTGCTGGCGG TACTGGCCAT GGGCCTGCCC CCGGCACACG GCCCTACGCT GCCTGCTGCG CATTCCGTTG CCAATAGGCG GACGCCTCGG GTGATCGGTG TTGACGATTT CGCTCTACGC CGGCGGCACC GCTACGCCAC CGTGGTGATC GACGCCGAGG CCCATGAGCG GATCGAGGTG CTACCCAACC GCACCGCCGA CACCCTGCAA GCGTGGTTGC GCGCGCATCC CGGCGTCGAG GTCGTATGCC GCGACGGCTC GGCGACCTAC GCCGAGCCCA TCCGGCGCGC CCTGCCCGAC GCGATGCAGG TCGCCCACCG GTGGCACCTA TGGCACAACC TCTGCGAAGC CGCCCTCAGC GAGGTGAAGG CGCACGGCTG CGCGCACACG GGACCTTGCT GGAACCCAGC TATTGTCTCG CCAATCTCAA TCGGGCATGA TCAGGATCAT GGATCTCGTA TGGGGTACAG AGACCAAAAG GTCGCAACTC GGTTGCCGAT CCTGGCCTCG ACACGCCCTC ACGAAGCGCC TTAA
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Protein sequence | MVFSGLSPLV IEDVTDEGER IVVLARTPRD AAICPICGAS SGRVHGYHWR TVADVAVDGR RVVVRVRVRV RRLVCPTRGC RHTFREQVPG VLERYQRRTA RLNRQVKAVV KELAGRAGSR LLAVLAMGLP PAHGPTLPAA HSVANRRTPR VIGVDDFALR RRHRYATVVI DAEAHERIEV LPNRTADTLQ AWLRAHPGVE VVCRDGSATY AEPIRRALPD AMQVAHRWHL WHNLCEAALS EVKAHGCAHT GPCWNPAIVS PISIGHDQDH GSRMGYRDQK VATRLPILAS TRPHEAP
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