| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4122 |
|---|
| Symbol | |
|---|
| ID | 5708102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 4681951 |
|---|
| End bp | 4683222 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641273550 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001538903 |
|---|
| Protein GI | 159039650 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTACCG TTCTGCGTCG CCCGGACTTC CGGCTGCTCT TTGGTGGCCT ACTGGCCAGC
ATGACGGCCG AGTCGATCCT GCTGCTCGCA CTCGCCGTCT GGGTCAAGGA GTTGACCGGA
TCGAGCGGAC TGGCCGGGGC CACCATCTTC GCGATCATCG CCCCGATGAC GCTGGCGCCC
CTGGTTGGCT GGATCGTCGA CCGCTACCCG CGCCAGCCCC TGTTCGTGGC CGTCAACCTG
GTCACCGCCA CCCTGCTCAC CCCGTTGTTC GCCGTCCGCG ACCGCACCGA CCTCTGGCTC
GTCTACCTGG TCGCGATCCT CTACGGCCTG TCCTACGTCA CCCTGAGCGC GGTGCTCAGC
GGCCTCATCC GTAGCCTGGT CCCGGCGGAG CTGCTGGCCG ACGCGAACGG CGTGCTGCAG
ACGGTGCGGC AGGGCCTGCG GCTGATCGGC CCGCTGGCCG GGGCCGCCCT CTACTCCACC
GCCGGCGGTG GACTGCTGAC CGGGGTAGCG GTGACCGGCT TCGTGACCGC AGCGGTGCTG
GCGGGTCTGC TCCGGGTGAC CGAACCGCCC TGGTCTCGAC CGGAACCGCG GCGCTGCGTC
CGTACCCGCT CGTCGCCTCG GTCCGCCGAG CTGGGCGCCG GCCTTCGGTA CCTGGCCGAC
GAGCCGGCGC TGCGCCGGGC CCTGCTCGGC TACGGGCTCG GCTCGTTGGT GATGGGCTTC
AGCGAGTCAC TGATCTTCGC GTACGTCGAC CAGGGGCTTC GCCGTGACGC GACGTTCGTG
GGCGTACTCG TCACGGTGCA GGGAGCCGGC GGTCTAGCCG GCGGGCTGGT GTCCCCAGGT
GTGATCCGGC GGGCGGGGGA GGTGGGCGCG CTCGCGGTGG GGGTGGCCCT GTTCGGGGTG
GCCGCGCTGG CGTTGTCCTA CCCGAACCTG TGGCTGGGCT GCACCGCGGT CCTGCTGGCC
GGGGCTTCCC TGCCGCTGAC CATGGTCGGG CTGCACACGC TGATCCAGCG GCGCACCCCG
CCACGGCTCA TCGGACGGGC CGCCGCCGGT GCCGAGGCGG TGGTCAGTGG CCCACGGGCA
GTGTCCATCG GCGTCGGCGC ACTGCTCGTG GGGGTCATCG ACTACCGTCT GCTGTTCGTG
GTGGTGAGCC TGGTCACCCT ACTCGCCGGC GGCTACCTCT GGGGCGGTCG CCGGTTGAGC
CGACCACCCC AGCCACCGCC GCCCGCAGGG CGCACACAGG TCAGCCAACA ATCGTGGACA
GGTGCTCCTT GA
|
|---|
| Protein sequence | MRTVLRRPDF RLLFGGLLAS MTAESILLLA LAVWVKELTG SSGLAGATIF AIIAPMTLAP
LVGWIVDRYP RQPLFVAVNL VTATLLTPLF AVRDRTDLWL VYLVAILYGL SYVTLSAVLS
GLIRSLVPAE LLADANGVLQ TVRQGLRLIG PLAGAALYST AGGGLLTGVA VTGFVTAAVL
AGLLRVTEPP WSRPEPRRCV RTRSSPRSAE LGAGLRYLAD EPALRRALLG YGLGSLVMGF
SESLIFAYVD QGLRRDATFV GVLVTVQGAG GLAGGLVSPG VIRRAGEVGA LAVGVALFGV
AALALSYPNL WLGCTAVLLA GASLPLTMVG LHTLIQRRTP PRLIGRAAAG AEAVVSGPRA
VSIGVGALLV GVIDYRLLFV VVSLVTLLAG GYLWGGRRLS RPPQPPPPAG RTQVSQQSWT
GAP
|
|---|
| |