Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4120 |
Symbol | |
ID | 5708100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4679499 |
End bp | 4681658 |
Gene Length | 2160 bp |
Protein Length | 719 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641273548 |
Product | UvrD/REP helicase |
Protein accession | YP_001538901 |
Protein GI | 159039648 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.344601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGTCCC ACTCAGCCTC CGACCGGGTG CTCGCCGGGC TCGACCCAGA GCAGCGGGCG GCGGTGACCG CCCCAGCCGG CCCGGTCTGT GTGCTCGCCG GCGCCGGTAC TGGCAAGACC CGGGCAGTCA CCTCCCGGAT CGCCCACCGG GCGTTGACCG GGGAAATCCT GTCCCGGCAT CTGCTCGCGG TCACTTTCAC CGCACGGGCC GCCGCCGAGC TGCGCAGCCG GCTCACCGCA CTCGGGGTGC CCGGCGTACA GGCGCGAACC TTCCACGCCG CGGCGCTCCG TCAGGTGCGC TACTTCGCGC CCCGGCTGCT CGCCGGTCGG GCGATGCCCG AGCTGCTGGA CAGCAAGGTC CGGCTGGTCA CCCTCGCCGC CGCGAAGGTC GGAATCCGCG CGGACCGGAC CGGTACCCGG GACCTCGCGG GCGAGATCGA GTGGGCCAAG TCGTCCCTGG TCGAGCCCGG GGAATACGTG GTCGCGGCGG CCAAGGCGTT ACGCGAGACC CCGTACGAGC CAGCGAGAGT CGCCGACGTC TTCGCCGCGT ACGAGCAGGT CAAGCGTTCC GGCGGGGTGA TCGACTTCGA GGACATGCTG CGTGCCGCGA TCTGGGGCAT CGAGGAGCAT CCCGACGTGG CCGACCAGGT ACGCGCCCAG TACCGGCACT TTGTCGTGGA CGAGTACCAG GATGTGAACC CGCTCCAGCA ACGGCTGCTG GAGGCGTGGC TCGGCGGCGG AGACGACCTG ACCGTGGTGG GTGACGCGAG CCAGACCATC TACTCGTTCA CCGGCGCGAC CTCCTCCTAT CTGGTCGACT TCCCGCGTCG GCACCGCAGT GCGACCGTGG TCCGCCTGGT GCGTGACTAC CGGTCCACCC CCCAGGTGGT CGGGTTGGCC AACGCGGTGA TCTCACCAGC CCGGGGCTCC GAGGCTCGGT TGCGGTTGGA GTTGGTCGGC CAGCGCCCAC CAGGCCCCGA GCCCGACCTG CGGATCTTCA CCGACGAGCC GGCCGAGGCC GCCGCCGTCG CCGCCCGCTG CCGGGCCCTG ATCGACGCCG GCACGCCGGC CCGGGAGATC GCTGTGCTGT TCCGGACCAA CGCGCAGTCC GAGGTCTACG AGAAGGCGCT GACCGAGGCC GAGGTGCCGT ACCAGGTGCA GGGTGCGGAG CGGTTCTTCG AGCGCGTCGA GATACGGCAG GCGATGGTCG CGCTGCGCGC CGCCACCCGC TCCCTCCCCG GCGGGATCCC ACTGCCGGCG GCCGTGGTCG AGGCGTTGGC CGCCGTGGGC TGGGCTCCGG ATACGCCACC GGCCGGTGGC GCCGCCCGCG AGCGGTGGGC GGCCCTCGCC GCGCTGGTCC AACTCGCCGA GGAGTACGCG GCCGCCGCGC CGGTGGTGCC GATCGGGCCG GCCGCCGCGG TCGAACGCCC GGCCACCCTG GCCGACTTCA CCGACGAGCT GGCTCGACGT GCCGCCGCCC AGCACGCGCC GACGGTCGAG GGCGTGACGC TCGCCTCCCT GCATTCGGCG AAGGGCCTGG AATGGGATGC CGTCTTTCTG GTCGGCCTCG CCGAGGGCAC TCTGCCCACC CTGTACGCGA AGACACCGGA GCAGGTGGAG GAGGAACGCC GGTTGCTCTA CGTGGGCATC ACCCGGGCCC GGGAGTGGCT CTGGCTGTCG TACGCGTCGG CCCGTTCACC CGGGGGACGG CCCCGGCGGC CCTGCCGGTT CCTGCCGCGG CTGAGTCCTT CCGGTGGGAG CGGGCGGGCC GGTGCGGGCG GGGCCCGGCC TAGCGAGCGT CGGCGTACCC AGATCGTTTC CTGCCGGATC TGTGGTGCGA CCCTGCTCGC CGGCGCGGAG CGCAAGCTGG GCCGGTGCGC CGCCTGTCCG TCCGACATCG ACGAGGAGCT GCACGGGCGG CTGCGCGAGT GGCGGCGTCG GATGGCCGCC GGTCAGCGGG TGCCGGCCTA CGTGGTGTTC ACCGACGCGA CCCTGGTCGC GTTGGCTGAG CGGCGCCCTC AGCAGCCCCG TGACCTCACT GCGATCGCTG GGATCGGGGC CCGCAAGCTG GGGCTCTACG GCGAGGCGGT GCTGGCGCTG GTAGCCGGCG CGGCGGTGGA CGAGGTCTGC CCGGAGAGAA CTTCGGAAAT CTTGCCGTAA
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Protein sequence | MVSHSASDRV LAGLDPEQRA AVTAPAGPVC VLAGAGTGKT RAVTSRIAHR ALTGEILSRH LLAVTFTARA AAELRSRLTA LGVPGVQART FHAAALRQVR YFAPRLLAGR AMPELLDSKV RLVTLAAAKV GIRADRTGTR DLAGEIEWAK SSLVEPGEYV VAAAKALRET PYEPARVADV FAAYEQVKRS GGVIDFEDML RAAIWGIEEH PDVADQVRAQ YRHFVVDEYQ DVNPLQQRLL EAWLGGGDDL TVVGDASQTI YSFTGATSSY LVDFPRRHRS ATVVRLVRDY RSTPQVVGLA NAVISPARGS EARLRLELVG QRPPGPEPDL RIFTDEPAEA AAVAARCRAL IDAGTPAREI AVLFRTNAQS EVYEKALTEA EVPYQVQGAE RFFERVEIRQ AMVALRAATR SLPGGIPLPA AVVEALAAVG WAPDTPPAGG AARERWAALA ALVQLAEEYA AAAPVVPIGP AAAVERPATL ADFTDELARR AAAQHAPTVE GVTLASLHSA KGLEWDAVFL VGLAEGTLPT LYAKTPEQVE EERRLLYVGI TRAREWLWLS YASARSPGGR PRRPCRFLPR LSPSGGSGRA GAGGARPSER RRTQIVSCRI CGATLLAGAE RKLGRCAACP SDIDEELHGR LREWRRRMAA GQRVPAYVVF TDATLVALAE RRPQQPRDLT AIAGIGARKL GLYGEAVLAL VAGAAVDEVC PERTSEILP
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