Gene Sare_4066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4066 
Symbol 
ID5704149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4623975 
End bp4624745 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content73% 
IMG OID641273492 
Producthypothetical protein 
Protein accessionYP_001538847 
Protein GI159039594 
COG category[R] General function prediction only 
COG ID[COG3176] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.311734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0821052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTTC TACCCGCCGC GCTGACCACC AGCGGATACA CCCTGTCGAT CGCCGACGAC 
CCGGGTCACG TCGTGGCCGC GCAGCGGCTG CGGCACGAGG TGTTCGCCAC CGAGCTGGGC
GCCACCCTCC GCCCGGAGGC CGACGGCCTC GATGTGGACG ACTTCGACCC ACACTGCGAT
CACCTGATCG TGCGTCAGCA CCGTGACGCT GCCGTCGTCG GGACGTATCG GCTGCTGCCG
CCGGGCCGGG TGCAGCGCCG GTACGCCGAC GGAGAGTTCG ACCTGGCGGC CCTTGACCCG
CTCCGGGACG ACCTGGTCGA GGCTGGTCGG TCCTGCGTGC ACCCCGAGCA CCGGACCGGT
GCCGTCCTCA CCCTCATGTG GGCCGGCATT GCCCGCTACC TGCACCTGCG CGGATCCCGG
TGGCTCGGTG GCTGCGCCTC GGTGCCGGTC GCCGACGGTG GGCGCGCTGC CGCCGAAGTG
TGGGCTCTCG CCAGGGCCCG GCATCTGGCC CCGCCGCCGC TGCGGGTGCG CCCGCTGCGC
CCTTGGTTCG CCGAACCGGG CGTGCCGCCG GCGGCAACCG CGGTCGGCGG GACGGTGGCC
CGGGCGCTAC TGCCGCCGCT GCTTCGCGGC TACCTCCGGC TCGGCGCCTG GGTCTGCGGC
GAGCCGGCGT ACGATCCGGA TTTCGGGGTC GTCGACTTCT ACCTGCTCTT CTCGCTGGAC
CGGATGAACC CGCGCTACCT GCGGCACTTC CTGGGTGGAG TGCAGCGGTG A
 
Protein sequence
MAVLPAALTT SGYTLSIADD PGHVVAAQRL RHEVFATELG ATLRPEADGL DVDDFDPHCD 
HLIVRQHRDA AVVGTYRLLP PGRVQRRYAD GEFDLAALDP LRDDLVEAGR SCVHPEHRTG
AVLTLMWAGI ARYLHLRGSR WLGGCASVPV ADGGRAAAEV WALARARHLA PPPLRVRPLR
PWFAEPGVPP AATAVGGTVA RALLPPLLRG YLRLGAWVCG EPAYDPDFGV VDFYLLFSLD
RMNPRYLRHF LGGVQR