| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3928 |
|---|
| Symbol | |
|---|
| ID | 5703664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 4472019 |
|---|
| End bp | 4473746 |
|---|
| Gene Length | 1728 bp |
|---|
| Protein Length | 575 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641273353 |
|---|
| Product | cobyric acid synthase CobQ |
|---|
| Protein accession | YP_001538710 |
|---|
| Protein GI | 159039457 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1492] Cobyric acid synthase |
|---|
| TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.111937 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0307354 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGGCG GGCTGCTGGT CGCCGGCACC ACCTCGGACG CCGGCAAGAG CGTACTCACC
GCCGGGATCT GTCGATGGCT GCACCGGCGG GGCGTGCGGG TGGCGCCGTT CAAGGCGCAG
AACATGTCCA ACAACTCGGC CGTGGTGGTC GGCCCGGACG GACGCGGCGG AGAGATCGGA
CGGGCCCAGG CGATGCAGGC GGCGGCCTGT GGGCTGGCAC CGGATCTGCG GTTCAATCCC
GTGCTGCTCA AGCCCGGCAG CGACCGGACC AGCCAGGTGG TGCTGCTCGG TGAGGCGGTC
GACACACTCA CCACCGGTAC GTTCCGTCAG CTTCGACCCC GTCTCGCCGA TACCGCGTAC
GCGGCGCTGG CTGACCTGCG GGCGACCCAC GACGTGGTGA TCTGCGAGGG GGCAGGCAGC
CCAGCGGAGA TCAACTTACG GGCCGGGGAC TACGTCAACA TGGGGCTGGC CCGGCACGCA
GGCCTGCCCG CGATCGTGGT CGGCGACATC GACCGCGGGG GTGTCTTCGC CTCGATGTTT
GGCACCGTAG CCCTGCTGGA GCCGGCCGAC CAGGCGCTGG TCGCCGGATT CGTCATCAAC
AAGTTCCGCG GTGACCCGAG CCTGTTGGCC CCGGGCCTGG ACATGCTGCG TCAGGTCACC
GGGCGGCCCA CGTACGGCGT GCTGCCCTGG GCGCTCGACC TCTGGCTGGA CGCGGAGGAC
TCGCTTGCGT ACGGGCGGGT ACTCGGCCGC CCGGCCGCCC CCCGTGGCAG TGACTGGCTG
GATGTGGCCG TGGTACGGCT GCCTCGGATC AGTAACGCCA CCGATGTCGA GGCACTCGCC
ACCGAGCCGG GCGTGCGGGT GCGCCTCACC GTCGAGCCAG CCGAGCTCGC CGCCGCCGAC
CTGGTCGTGC TGCCCGGGTC CAAGTCGACC GTGGCGGACC TGGACTGGCT TCGGCAGTCC
GGCCTCGCCG ATGCCGTGCT CGCCCACGCC GCCGCCGGGC GGCCTCTGCT CGGTGTCTGC
GGCGGGTTCC AGATGCTCGG GCGTCTCATC CACGATCCGG TGGAGAGTCG GCGGGGCAGC
GTACCCGGCC TGGGGCTGCT GCCGGTCGAG GTCACCTTCG ACCCGTGCAA GACGGTTCGC
CGATCTGCCG GCATCGGCTG GGATGCCGAG CCGGTCGGCG GCTACGAGAT CCACCATGGG
TACGTCTCGG CCGCCGCCCC CGACCTCGCG CCGCTGTTCG CCTACCACGA CGGCACCGGT
GAGGGCGCGG TCGCCGGATC GGTGTACGGC ACCCACTGGC ACGGGGCGTT CGAGTCCGAC
GGGTTCCGCC GCCGGTTCCT GGCCCGGGTG GCACGTCAAG CCGGACGGCA CGGTTTCCAG
GTCGCCCCGG ACACCTCCTT CGCCGGTGCT CGCGAACGCT CCCTGGACCT GCTCGGCGAT
CTGGTCGAGG AGCACCTGGA CACGGCCGGG CTGTGGCGGC TGATCGAGTC CGGCCCGTCA
CCGGGCCTGC CGTTCATCCC GCCGGGCGCG CCAGACGCGG GGCCCCGGAC CGGGAGCGGC
GCGCCAGACA CGGAGCCCGC GGACCGGGAG CCGGGGACAG CCGCGGGCAG GGGCCCGGGT
TCAGTGGCGA ACGTCGGCGG GGCGGTCGGT GACCGGGAGT CCGGCATCCC GCCAGGCGTC
CACTCCTCCG ATGACATCGG TGGCTCGGTG CAGGCCGAGC GCGCGTAG
|
|---|
| Protein sequence | MSGGLLVAGT TSDAGKSVLT AGICRWLHRR GVRVAPFKAQ NMSNNSAVVV GPDGRGGEIG
RAQAMQAAAC GLAPDLRFNP VLLKPGSDRT SQVVLLGEAV DTLTTGTFRQ LRPRLADTAY
AALADLRATH DVVICEGAGS PAEINLRAGD YVNMGLARHA GLPAIVVGDI DRGGVFASMF
GTVALLEPAD QALVAGFVIN KFRGDPSLLA PGLDMLRQVT GRPTYGVLPW ALDLWLDAED
SLAYGRVLGR PAAPRGSDWL DVAVVRLPRI SNATDVEALA TEPGVRVRLT VEPAELAAAD
LVVLPGSKST VADLDWLRQS GLADAVLAHA AAGRPLLGVC GGFQMLGRLI HDPVESRRGS
VPGLGLLPVE VTFDPCKTVR RSAGIGWDAE PVGGYEIHHG YVSAAAPDLA PLFAYHDGTG
EGAVAGSVYG THWHGAFESD GFRRRFLARV ARQAGRHGFQ VAPDTSFAGA RERSLDLLGD
LVEEHLDTAG LWRLIESGPS PGLPFIPPGA PDAGPRTGSG APDTEPADRE PGTAAGRGPG
SVANVGGAVG DRESGIPPGV HSSDDIGGSV QAERA
|
|---|
| |