Gene Sare_3907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3907 
Symbol 
ID5704980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4448434 
End bp4448913 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content69% 
IMG OID641273332 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001538689 
Protein GI159039436 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.960178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGAGA TGGACTGGGC GCTGCTGCGT GAACTACAGA CCGATGCCCG CCTGTCGTAC 
AGCGAACTGT CCCGACGGGT GCACCTCTCC CCACCAGCGG TAGCCGAGCG CGTACGCCGG
CTGGAGGAGT CGGGGGTCAT CACCGGCTAC CACGCGCACG TCGATCCAGC CCGCGCTGGA
CGGTCGGTGG TCGCACTGAT CCGGATGTCC TGTTACGGCG CCCGCTGCAT CCTCAACCAC
CCGGAGACCA CCGACTGGCC GGAGATCATG CAGGTCCACC GGATCACCGG CGACGCGTGC
AGCATGCTGA CGGTCACCGC AGGCTCGATC GGGGAGTTCG AGGCAGTCAT CGACAGACTC
GCCGCGTACG GCCAACCGTC CAGCACGATG GTGCTCTCCA CCCCGCTCGG CTGGCGGGCG
GTCACCCCAC CCGTCCCCGA CGGCAGCGAC AAGACACCGT CGTCGCGCCG CCGCCGCTGA
 
Protein sequence
MDEMDWALLR ELQTDARLSY SELSRRVHLS PPAVAERVRR LEESGVITGY HAHVDPARAG 
RSVVALIRMS CYGARCILNH PETTDWPEIM QVHRITGDAC SMLTVTAGSI GEFEAVIDRL
AAYGQPSSTM VLSTPLGWRA VTPPVPDGSD KTPSSRRRR