Gene Sare_3882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3882 
Symbol 
ID5706379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4424576 
End bp4425334 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content63% 
IMG OID641273307 
Producthypothetical protein 
Protein accessionYP_001538664 
Protein GI159039411 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000462301 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0482464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAC CACAGATCCC GAACAGCGGA CGCATTATCG ATCATTGGCT CGGCGGCACA 
CACCACTACC CGGCAGACGC GGCGGCAGCG AGTGAATTCG CCGGTCTATA CCCGGGGTTT
CCCCAGGTGT ACCGCACGCT GCGGGAGTTC GTCGGGCGCG CTGTCCGGGC CGTCGCGGAC
GAAGGAGTCG ACCAGTTCCT GGTACTCGGG GCAGGAATCC CGACACAGGG CAACGTGCAC
GAGGTCGTGC CGAGGGCCCG CGTTCTCTAT ACCGACATCG ACCCCGCCAA CATCGCTCTT
GGGCGCGAGA TCCTCGCCAC CACGCCGGGA GTGGACTACG CCTACTGCGA CGCCTCGGAC
CCTGGCACCC TTGATCAGGA ATCAGCGGAG CGCATCCTCG ATCTCACCGC ACGGCTCGGC
GTGGTAGTAG TCGGGATTTC TACATCCCTG GATGACGGGG CCCTTCAGGA CACACTTTCC
GATCTCTTCG ACTGGGCGCC TCCCGGCAGT TTCCTGGTGG CGGACTTCGA CGGTGAGGCC
TTGGCCTCCC TTCCGACGAT TCTGGCGAAG ATCCTCGATC AGGCCGGTCA ACCGCTACAC
CTACGTGGTC CGGACCGAAT TCGACCGCTA CTTGGACGTT GGCAACTGAC TGACGACGGC
ATCTGTGCAG TCGACGTCTG GCGCAGTCCG ACACCGCATC CCGACAAGGT GTTCGTGTAT
GGCTGCGTGT CACACAAGCC CTACGAAATG AGCCAATGA
 
Protein sequence
MSEPQIPNSG RIIDHWLGGT HHYPADAAAA SEFAGLYPGF PQVYRTLREF VGRAVRAVAD 
EGVDQFLVLG AGIPTQGNVH EVVPRARVLY TDIDPANIAL GREILATTPG VDYAYCDASD
PGTLDQESAE RILDLTARLG VVVVGISTSL DDGALQDTLS DLFDWAPPGS FLVADFDGEA
LASLPTILAK ILDQAGQPLH LRGPDRIRPL LGRWQLTDDG ICAVDVWRSP TPHPDKVFVY
GCVSHKPYEM SQ