Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3882 |
Symbol | |
ID | 5706379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 4424576 |
End bp | 4425334 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641273307 |
Product | hypothetical protein |
Protein accession | YP_001538664 |
Protein GI | 159039411 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000462301 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0482464 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGAAC CACAGATCCC GAACAGCGGA CGCATTATCG ATCATTGGCT CGGCGGCACA CACCACTACC CGGCAGACGC GGCGGCAGCG AGTGAATTCG CCGGTCTATA CCCGGGGTTT CCCCAGGTGT ACCGCACGCT GCGGGAGTTC GTCGGGCGCG CTGTCCGGGC CGTCGCGGAC GAAGGAGTCG ACCAGTTCCT GGTACTCGGG GCAGGAATCC CGACACAGGG CAACGTGCAC GAGGTCGTGC CGAGGGCCCG CGTTCTCTAT ACCGACATCG ACCCCGCCAA CATCGCTCTT GGGCGCGAGA TCCTCGCCAC CACGCCGGGA GTGGACTACG CCTACTGCGA CGCCTCGGAC CCTGGCACCC TTGATCAGGA ATCAGCGGAG CGCATCCTCG ATCTCACCGC ACGGCTCGGC GTGGTAGTAG TCGGGATTTC TACATCCCTG GATGACGGGG CCCTTCAGGA CACACTTTCC GATCTCTTCG ACTGGGCGCC TCCCGGCAGT TTCCTGGTGG CGGACTTCGA CGGTGAGGCC TTGGCCTCCC TTCCGACGAT TCTGGCGAAG ATCCTCGATC AGGCCGGTCA ACCGCTACAC CTACGTGGTC CGGACCGAAT TCGACCGCTA CTTGGACGTT GGCAACTGAC TGACGACGGC ATCTGTGCAG TCGACGTCTG GCGCAGTCCG ACACCGCATC CCGACAAGGT GTTCGTGTAT GGCTGCGTGT CACACAAGCC CTACGAAATG AGCCAATGA
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Protein sequence | MSEPQIPNSG RIIDHWLGGT HHYPADAAAA SEFAGLYPGF PQVYRTLREF VGRAVRAVAD EGVDQFLVLG AGIPTQGNVH EVVPRARVLY TDIDPANIAL GREILATTPG VDYAYCDASD PGTLDQESAE RILDLTARLG VVVVGISTSL DDGALQDTLS DLFDWAPPGS FLVADFDGEA LASLPTILAK ILDQAGQPLH LRGPDRIRPL LGRWQLTDDG ICAVDVWRSP TPHPDKVFVY GCVSHKPYEM SQ
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