| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3656 |
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| Symbol | |
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| ID | 5704620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 4218808 |
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| End bp | 4220355 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641273081 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001538445 |
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| Protein GI | 159039192 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00788445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.022371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACTCCC GGCCTGGCCG GTCAACGCCG TCCCGACGGG CCGCCTTGGT CGGCCTGTGT
ACCGCTGCCA CCCTGGTGTG GCTCGCGTTC TCCGACCTGG GTGTGGCGCT ACCGACGATC
GCCACCGAGT TGAGCGTCAA CCTGACCGAC ATGCAGCGGG CGAACAACGC CCTGAGTATC
GCCTGCGGCA CACTCCTACT GGCCGGCGGA CGCCTCACCG ACCTCTACGG CCATCGACGG
ATGCTGCTCC TCGGCCTACT GATCTTCGGT ATTGCCACCT TGGCGACCGC GTTCACACCC
AACCTCGCCG GCCTGGTCGC CGGTCGGGCG ATGATGGGCG TCGGCAGCGC ACTCATCCTG
CCCGCCTCGC TAGCCATGAT CCCGGCGCTG TTCGACCGGG CCAGGCAGCC GTCGGCATTC
GCCGCATGGG CAGCGACCAC CTGGGCGGGG CAGGCGGTCG GGCCCGCCAT CGGCGGAGGA
CTCACCACCC TGTTGGGCTG GCGGTCGCTG TTCTGGCTCA CCGCGCCGGT GGTGCTTGTC
GTGTACGTGA TAACCAGCCG ATACGCACCC AAGGCAAGCA GGCGCCGCGG GCGGGTCGAC
CTGGTCGGGC TGGCCACCGG CGCCGGAGCA GCGCTGTGTC TGCTCTTCGC GTTGACCGAG
AGCCAGCAGG TCGGCTTCAA CGATCCTTTG ATCATCGTTT TGTTCGCCGC GACGCCGGTA
CTCGGCGCAG CGTTCGTGTT CATCGAGACA AAGGCCGCTG ATCCGCTGGT GGATCTGCGG
CTGTTCCGCA CCCGCAGCTT CACTGCCGCT CTCATCGTCA ACCTGGCGAT GAGCATGTCC
TTCGCCGGCA CGCTGTTCGT GCTGTCCCTC TACCTCCAGG ATGTCCGCGG CTACACCGCG
TTCGTGGCCG GCCTGCTGCT GATCCCCGCC GCCGGAACGA TCCTGGGGTT CAACACTGTC
GGAGCGCGGC TGGTCACCCG ACACAACGCC CGCTCCCCCT CGCTCTGGGG CCTCGTCCTG
GTCGGTCTCG GCGGTTTCGC CATCAGCGCC CTGCTGCCCT CCCTGTCCGT CCTGGCAGTG
ATCCTGGGCC TGCTCATCAT CGGCGCCGGG CTGGGCCTGC TGTCCGTGCC CGTGGCCGAC
ACCGATGTCG GAGGTCCACC GGCCTCCCTC GCCGGCGCCG CGTCCGGGGC GTACAGGAGC
AGCAGCATGC TGGGTGGCGC ACTCGGCGTC GTCCTCCTGA CCACGGCGAC AACCCGCTTC
GGCCGCGCCG AGGCCGCACC GGTCAGCACC GCGGCCGGAC TCACCGAAGC GGAATCCAAC
CAGGTCGTCA ACGCACTGAC CAACTCCCAG ACCGCGAGCG CCATCCTCGA CAAACTGCCG
GCAAACGAAC GGTCCCTCGT CGTCGGTGTC TACAACCAGG CGTTCACGGA CGGAGTTTCG
ACCGCCCTCA TCCTCGGTGG TGTGATCGCG GTGGCGGGCA CGGTGCTGGC TGGTTGGATC
TGGCCCCGCA CCCACAGAGC CCGACACACG ACGAACCCCG GACCTTAG
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| Protein sequence | MYSRPGRSTP SRRAALVGLC TAATLVWLAF SDLGVALPTI ATELSVNLTD MQRANNALSI
ACGTLLLAGG RLTDLYGHRR MLLLGLLIFG IATLATAFTP NLAGLVAGRA MMGVGSALIL
PASLAMIPAL FDRARQPSAF AAWAATTWAG QAVGPAIGGG LTTLLGWRSL FWLTAPVVLV
VYVITSRYAP KASRRRGRVD LVGLATGAGA ALCLLFALTE SQQVGFNDPL IIVLFAATPV
LGAAFVFIET KAADPLVDLR LFRTRSFTAA LIVNLAMSMS FAGTLFVLSL YLQDVRGYTA
FVAGLLLIPA AGTILGFNTV GARLVTRHNA RSPSLWGLVL VGLGGFAISA LLPSLSVLAV
ILGLLIIGAG LGLLSVPVAD TDVGGPPASL AGAASGAYRS SSMLGGALGV VLLTTATTRF
GRAEAAPVST AAGLTEAESN QVVNALTNSQ TASAILDKLP ANERSLVVGV YNQAFTDGVS
TALILGGVIA VAGTVLAGWI WPRTHRARHT TNPGP
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