Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3509 |
Symbol | |
ID | 5703318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 4047294 |
End bp | 4049093 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641272936 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001538302 |
Protein GI | 159039049 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.889293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0246515 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCGAGT TCTCCGTCCC ACCGATCGTC ACCGTCGGCG ACTCGGCCAA TCTAACCGAT CCGGTCTGGG ACAACGCCGA GGCCGCCCCG GACGTGGTGC AGTTCATCCG CGAGGGTGCC GACGGCGCCC GGGTCGAGGT GACCTGCCAT CAGTTCCGTG ACGAGGTGAC GGCGGTGGCA CGCGGCCTGG TCGCAGCCGG TGTGCAGCCC GGCGACCGGG TCGGCCTGAT GAGCCGAACG CGGTACGAGT GGACGCTGTT CGACTACGCC ATCTGGGCCG CCGGCGCGAT CACGGTGCCG ATCTACGAGA CCTCCAGCGC CGAACAGGCC GCCTGGATCC TGTCCGACTC GGGGGCGGTC GCCATCCTGG TCGAGACGAG CGCCCACGCC ACGCTGGTTG CCGACGTGCG CGACCGGGTA CCCGATCTGG CGCACGTGTG GCAGATCGAC CTCGGCGCGA TGGACGAGCT GATCGCCACC GGCGAGTCGG TGGATCCGAC CGAGATCGAG CGGCGACGCG CGGCCGTTCG GGCCGACGAC ATCGCCACCA TCGTCTACAC CAGCGGCACC ACTGGCCGCC CCAAGGGCTG CATGCTGACC CACCGCAGCA TGTACGCCGA TGTCGCCAAC GCCGTGCCGG TGCTGCCGAA CCTGTTCGGC CCAGGTGCCT CCACGCTGCT GTTCCTCCCC CTCGCGCACG TCTTCGCCCG GCTGATCCAG GTCGGCGTGG TCCAGGCCCG CGCCACGATG GCCCACTGCG CGGACACCAA GGACCTGATC GCCAGGCTGC AGGCCGTCCG CCCCACGTTC GTGCTCTCCG TCCCCCGGGT GTTCGAGAAG GTCTACAACT CCGCGAAGCA GAAGGCCGAA GCCGACGGCA AGGGCCGGAT CTTCGCCCGC GCCGAGGCGG TCGCCATCGC GTACAGCGAG GCCCTGGAGA CCCGGACCGG GCCGGGCCTG GCGCTCCGTG TGCAGCACGC CCTCTTTGAT CGCCTGGTCT ACCGCAAGCT GCGGGCCGCA CTTGGCGGGC GGTGCCGCGA CGCGATCTCG GGCGGCGCGC CGCTCGGCGC GCGGCTCGGG CACTTCTTCC GCGGCGTGGG GGTGACCATC TATGAAGGGT ACGGGCTGAC CGAGACCTCT CCCGCTGCCT GCGCCAACCG GCCCGGTGCG ATCCGAATCG GCAGCGTCGG ACGCCCACTG CCCGGCGTGA ACATCCGGAT CGACGACGAT GACGAGATCC TCATCGCCGG TGAACTGGTC TTCACGGGCT ACTGGCGCAA CGAGGCCGCC AGTGCGGAGG TACTCACCCC TGACGGCTGG TTCCGCACCG GCGATTTGGG CCAGCTCGAC AGTGACGGCT ACCTGAACAT CACCGGCCGA AAGAAGGAGA TCATCGTGAC CGCGGGCGGC AAGAACGTCG CCCCGGCGGT CCTCGAGGAC CAGGTCCGGG CGCATCCTCT GGTCAGCCAG TGCGTGGTGG TCGGTGACCG ACAGCCCTTT GTCGCCGCGC TGGTCACCGT GGACGAGGAG GCGCTGCCGG CGTGGCTGGA GAACGCCGGC CTACCCGCGG CCACCCCAAT CGAGGAGCTC TACCAGCATG AAGGGCTGCG CTCCGAGATC CAGACCGCGA TCGACACCGC CAACCGCGCC GTGTCCAGGG CCGAGGCCAT CAAGGTCTTC CGGATCCTCC CCCGGGACTT CACGGAGGCG ACCGGTGAGC TGACTCCTTC ACTCAAGGTC AAACGACAAA TCGTGCACAA ATCGTACGCC ACGGAGATCG CCGATATCTA CCGGAGCTGA
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Protein sequence | MREFSVPPIV TVGDSANLTD PVWDNAEAAP DVVQFIREGA DGARVEVTCH QFRDEVTAVA RGLVAAGVQP GDRVGLMSRT RYEWTLFDYA IWAAGAITVP IYETSSAEQA AWILSDSGAV AILVETSAHA TLVADVRDRV PDLAHVWQID LGAMDELIAT GESVDPTEIE RRRAAVRADD IATIVYTSGT TGRPKGCMLT HRSMYADVAN AVPVLPNLFG PGASTLLFLP LAHVFARLIQ VGVVQARATM AHCADTKDLI ARLQAVRPTF VLSVPRVFEK VYNSAKQKAE ADGKGRIFAR AEAVAIAYSE ALETRTGPGL ALRVQHALFD RLVYRKLRAA LGGRCRDAIS GGAPLGARLG HFFRGVGVTI YEGYGLTETS PAACANRPGA IRIGSVGRPL PGVNIRIDDD DEILIAGELV FTGYWRNEAA SAEVLTPDGW FRTGDLGQLD SDGYLNITGR KKEIIVTAGG KNVAPAVLED QVRAHPLVSQ CVVVGDRQPF VAALVTVDEE ALPAWLENAG LPAATPIEEL YQHEGLRSEI QTAIDTANRA VSRAEAIKVF RILPRDFTEA TGELTPSLKV KRQIVHKSYA TEIADIYRS
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