Gene Sare_3470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3470 
Symbol 
ID5708072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4003616 
End bp4004104 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content72% 
IMG OID641272897 
ProductYbaK/prolyl-tRNA synthetase associated region 
Protein accessionYP_001538263 
Protein GI159039010 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.116245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00805861 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGCCAC ACCCAAACGT ACGGGCGGCG CAGGAGACGC TGGACGGCGC CGGCGCACTC 
GACGGCTCCG GCGCGCCCAG CGTCATCCGC CTGCTACCCG ACGCGGTCCA CACCGCCGCG
GCAGCCGCCG CCGCGCTCGA CGTCGAGGTC GGACAGATCG CCAACTCCCT GGTCTTTGAG
GCGGATGGCA TGCCGCTGCT GGTGCTGACC TCCGGGGCAC ACCGGGTGGA CACCACCGGC
CTCGCCGCGT CGATCGGCGT CGCCCGACTC CGGCGGGCCA CCCCCGAGTT CGTCCGCGAA
CACACCGGAC AGGTCATCGG CGGAGTCGCC CCGATCGGCC ACCCCCGGCA GCTGCGCACC
CTGGTGGACA CCACCCTCGA CAAGTTCGAC GAGATCTGGG CCGCCGGTGG CGTGCCCCGG
GCGGTCTTCC CCACCACCTA TCCGGAACTG CTGCGGATTA CCGGCGGCAC ACCAGCCGAA
GTGGTGTGA
 
Protein sequence
MQPHPNVRAA QETLDGAGAL DGSGAPSVIR LLPDAVHTAA AAAAALDVEV GQIANSLVFE 
ADGMPLLVLT SGAHRVDTTG LAASIGVARL RRATPEFVRE HTGQVIGGVA PIGHPRQLRT
LVDTTLDKFD EIWAAGGVPR AVFPTTYPEL LRITGGTPAE VV