Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3434 |
Symbol | |
ID | 5704115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3958839 |
End bp | 3959519 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641272861 |
Product | hypothetical protein |
Protein accession | YP_001538227 |
Protein GI | 159038974 |
COG category | [S] Function unknown |
COG ID | [COG1799] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.447555 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00630531 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGTGCGC TGCGCAAGGC GGGGGTCTGG CTCGGTCTGG TCGAGGAGGA CGACGAGCGG GCCTACGACG ACGCTGGCTA CGACAAGGGT GGCTATCGTG AGTCGCGGTA CCGGTCGAGC CGATACTCCG AGGACTTCGG GGACGAGGAC GACGAGGACG AGGAAGCAGC CGTGCCCCGA TCGCGGCGGG GGGACCGGAG CCGGCTGGAG CGGGCTGCCG CGCGTTCCGG GGACGTGGAC CACAACGTCG AGGGTGAGCA GCCGGAGCGG GTCGAACGTG CCAGCGTTCG GTCGATCACC CGGTCCGCCG AACCGTCCGA GTCGTTGACC TATCACACCC GCGACAACCT GGCCCTGGCG CCACAGCCGG TTCGAGAGCG TGTGCCCGCG GACGAGGAGC AGCGCTACCA GATCACCACG CTGCATCCCA CCACCTACCG GGAGGCACGG ACCATTGGTG AGCACTTCCG GGACGGTGTT CCGGTCATCA TCAACCTGAC GGAGATGGAC GAGGCGGATG CGCGACGACT GGTTGACTTC GCCGCCGGGC TCGCCTTCGG GCTGCGCGGT ACGATCGAGC GCGTGACCAA TCGGGTGTTC CTGCTCTCGC CGGCTAATGT CCAGGTCACC GCGGAGGACA AAGCCAAGAT CGCTGAGGGC GGCTTTTTCA GTCTCAGTTG A
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Protein sequence | MGALRKAGVW LGLVEEDDER AYDDAGYDKG GYRESRYRSS RYSEDFGDED DEDEEAAVPR SRRGDRSRLE RAAARSGDVD HNVEGEQPER VERASVRSIT RSAEPSESLT YHTRDNLALA PQPVRERVPA DEEQRYQITT LHPTTYREAR TIGEHFRDGV PVIINLTEMD EADARRLVDF AAGLAFGLRG TIERVTNRVF LLSPANVQVT AEDKAKIAEG GFFSLS
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