Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3337 |
Symbol | uvrC |
ID | 5708292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3849576 |
End bp | 3851558 |
Gene Length | 1983 bp |
Protein Length | 660 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641272764 |
Product | excinuclease ABC subunit C |
Protein accession | YP_001538131 |
Protein GI | 159038878 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0998705 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00117638 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCTGATC CCTCGTCCTA CCGTCCCGCG CCCGGCACGA TCCCGGAATC ACCGGGGGTC TACCGTTTTC GCGACGGCAC CGGCCGGGTG ATCTACGTTG GCAAGGCGCG AAACCTGCGC AGCCGGCTGA ACTCGTACTT CGCTGATCCG GTCAATCTGC ACCAGCGCAC CCGGCAGATG GTGTTCACCG CCGAATCGGT GGACTGGATC TCCGTCGCCA CCGAGGTCGA GGCGCTCCAG CAGGAGTTCA CCGAGATCAA GCAGTACGAC CCGAGGTTCA ACGTCCGCTA CCGGGACGAC AAGTCCTACC CGTACCTGGC GGTCACCGTC GACGAGGAGT TTCCCCGCCT CCAGGTCATG CGCGGCGCGA AGCGTAGGGG CGTGCGTTAC TTCGGGCCGT ACTCGCATGC CTGGGCGATC CGCGAGACGC TCGACCTGCT GCTTCGGGTC TTTCCGGCAC GCACCTGCTC GTCGGGAGTG TTCAAACGAG CCGGTCAGGT CGGCCGCCCC TGCCTGCTGG GCTACATCGG CAAGTGCTCC GCGCCCTGCG TCGGCAGTGT CTCCGCCGAG GAACACCGCG ACATCGTCAA CGGCTTCTGC GACTTCATGG CCGGCCGGAC CGATGCCATG GTCCGCCGGT TGGAGCGGGA GATGGCCGAG GCCAGCGCGG AGCTGGAGTT CGAGCGGGCC GCCCGGCTCC GCGACGACCT GGCCGCCCTA CGCCGGGCGA TGGAGAAGCA GACCGTGGTG TTCGGCGACG GCACCGACGC CGACGTGGTC GCCTTCGCCG ACGACCCGCT CGAAGCGGCC GTGCAGGTGT TCCACGTGCG TGACGGTCGA ATCCGGGGCC AGCGCGGCTG GGTGGTCGAG AAAACCGAGG ACCTGACCGC CGGCGACCTC GTCCACCACT TCTGCACCCA GGTGTATGGC GGGGAACACG GTGAGGCGCA CGTCCCCCGG GAACTGCTCG TGCCCGAGTT GCCCGCGGAC GTCGAGGCGC TCGCCGACTG GCTCTCCGAG CATCGTGGCA GCCGGGTCAC CCTGCGGGTG CCGCAGCGCG GCGACAAGCG TGCCCTGCTG GAGACGGTCG CGCGTAACGC CACGGACGCC TTGGCCCGGC ACAAGCTCAA GCGCGCCGGT GATCTGACCA CCCGGAGCAA GGCCCTCGAC GAGATCGCCG ACACGTTGGG CATGCGGACG GCACCGCTGC GGATCGAGTG CTTCGACATC TCCCAGATCC AGGGCACCGA TGTGGTGGCC AGCATGGTGG TCTTCGAGGA CGGCCTGCCT CGCAAGAGCG AGTACCGGCG GTTCATCATC CGGGGCGCCA CCGACGACCT GTCGGCGATG TCGGAGGTAC TGCGGCGGCG TTTCGCCCGC TACCTGGACG CCCGGGCGGA AACGGGGGAG GCTGGCGTCG AGTCGGCCGG CGACCCGGAC GCCCCGGCCG GACCGGATGC GCCTGACGAG CCGCGGGTCG GCACCTTGGT CGACCCGACG ACGGGTCGAC CGCGCAAGTT CGCCTATCCG CCGCAACTGG TGGTGGTCGA CGGGGGCGCG CCGCAGGTCG CGGCGGCGGC GCAGGCCCTC GCCGAGTTGG GCGTCGACGA CGTGGCCCTG TGCGGTCTGG CGAAGCGACT GGAGGAGGTG TGGCTGCCCG ACGACGATTT CCCCGCCATT TTGCCCCGCA CATCCGAGGG CCTCTATTTG CTGCAACGCG TGCGTGACGA GGCGCACCGG TTCGCCATCA CGTTCCACCG GCAGCGGCGT TCCCGCCGGA TGACCGAGTC GGCGTTGGAT CGGGTGTCCG GGCTGGGTGA GGTGCGGCGC AAGGCGCTGC TGCGCCACTT CGGCTCCCTG AAACGGCTTG CCGCCGCCTC GGTGGAGGAG ATCACCGAGG TTCCTGGGAT CGGTAAGCGG ACGGCCGAGG CGATCCTCGC CGCGCTCGCC GACCCGACGG GGCAGAGTGA ACCGCGTAGA TAG
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Protein sequence | MADPSSYRPA PGTIPESPGV YRFRDGTGRV IYVGKARNLR SRLNSYFADP VNLHQRTRQM VFTAESVDWI SVATEVEALQ QEFTEIKQYD PRFNVRYRDD KSYPYLAVTV DEEFPRLQVM RGAKRRGVRY FGPYSHAWAI RETLDLLLRV FPARTCSSGV FKRAGQVGRP CLLGYIGKCS APCVGSVSAE EHRDIVNGFC DFMAGRTDAM VRRLEREMAE ASAELEFERA ARLRDDLAAL RRAMEKQTVV FGDGTDADVV AFADDPLEAA VQVFHVRDGR IRGQRGWVVE KTEDLTAGDL VHHFCTQVYG GEHGEAHVPR ELLVPELPAD VEALADWLSE HRGSRVTLRV PQRGDKRALL ETVARNATDA LARHKLKRAG DLTTRSKALD EIADTLGMRT APLRIECFDI SQIQGTDVVA SMVVFEDGLP RKSEYRRFII RGATDDLSAM SEVLRRRFAR YLDARAETGE AGVESAGDPD APAGPDAPDE PRVGTLVDPT TGRPRKFAYP PQLVVVDGGA PQVAAAAQAL AELGVDDVAL CGLAKRLEEV WLPDDDFPAI LPRTSEGLYL LQRVRDEAHR FAITFHRQRR SRRMTESALD RVSGLGEVRR KALLRHFGSL KRLAAASVEE ITEVPGIGKR TAEAILAALA DPTGQSEPRR
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