Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3315 |
Symbol | |
ID | 5707182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3825102 |
End bp | 3826055 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641272742 |
Product | protoheme IX farnesyltransferase |
Protein accession | YP_001538109 |
Protein GI | 159038856 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000327669 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGCATGA TCACCGAGCG CCCCGTCAGC GACACCGCCG GGCAGTCGGT CGGTGCGACG GACGGGACGG TCGGCAAGCG GCGCGAGATA CCGGCGGTGG TCGCGGCGTA CGTGGCGCTG ACCAAGCCGC GGATCGTGGA GCTGCTGCTG GTCACCACCG TGCCGGCGAT GATGCTCGCG CACGGTGGTC TGCCGCCGCT GTGGCTCGTG GCGGTGGTGC TGGTGGGTGG GTCGCTGGCG GCCGGCGCGG CCAGTGTCCT CAACTGCTAC ATCGACCGGG ACATTGATCA GGTGATGCGG CGCACCAAGC GCCGTCCGTT GCCGACGCAC ACCGTCTCAC CCCGCAACGC GTTGATCTTC GGTCTGGTGT TGGCGACGGT CTCGGTCACC CTGCTGGCCG TGTTCACCAA CGCCCTGGCC GCCGGGCTGA CCCTGGGCGC GATCCTCTAC TACGACCTGA TCTACACCGC CTGGTTGAAG CGCACCACTA CGGCGAACAC GTTCTGGGGC GGCGCCTGCG GGGCCGCGCC GGTGCTGATC GGCTGGGCTG CGGTGACCGG TTCACTCGCG CCGGCCGCGT GGGCGTTGTT CGGGGTCGTC TTCTTCTGGC AGATGCCGCA CTTCTACCCA CTGGCGATGA AGTACAAGGA CGACTACGCC CGGGCGGGCA TCCCGATGTT GCCGGTGGTG GCGTCGACCC GGCGGGTCAA CGCCGAGATT CTTGTCTTCG CCTGGCTGAC GGTGCTGGTC TCGCTGGTGG CCTGGCCGCT CGGGCTGGGT CCGGTCTATG GGCTGCCGAC CCTCGTCGTG GGGGCTGTCT TCCTGATCGA GGCGCACAAG CTCTGTCGTC GGGCGTCGCG GGGGGAGGCG GTCAAGCCGA TGCGGCTGTT CCACTGGTCC ACCACCTACC TGACCGTCGT GTTCGCCGCG GTTGCGCTGG ACGCGCTGAT CTGA
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Protein sequence | MSMITERPVS DTAGQSVGAT DGTVGKRREI PAVVAAYVAL TKPRIVELLL VTTVPAMMLA HGGLPPLWLV AVVLVGGSLA AGAASVLNCY IDRDIDQVMR RTKRRPLPTH TVSPRNALIF GLVLATVSVT LLAVFTNALA AGLTLGAILY YDLIYTAWLK RTTTANTFWG GACGAAPVLI GWAAVTGSLA PAAWALFGVV FFWQMPHFYP LAMKYKDDYA RAGIPMLPVV ASTRRVNAEI LVFAWLTVLV SLVAWPLGLG PVYGLPTLVV GAVFLIEAHK LCRRASRGEA VKPMRLFHWS TTYLTVVFAA VALDALI
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