| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3283 |
|---|
| Symbol | |
|---|
| ID | 5707789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 3789863 |
|---|
| End bp | 3791824 |
|---|
| Gene Length | 1962 bp |
|---|
| Protein Length | 653 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641272710 |
|---|
| Product | asparagine synthase (glutamine-hydrolyzing) |
|---|
| Protein accession | YP_001538077 |
|---|
| Protein GI | 159038824 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
|---|
| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.524928 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0234108 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGAC TCCTGGCCTT CTTCAGCGCG CGCGGGGATG CCGCGGCTCA CCGCGATCAC
ATCGCCGGCG CGTTGGAATG CCTGCATCAT CGTGGCCCGG ACGAGACCGG GGTTGAGGTT
GTCGGCGACG CCTCCGGACA GTATGCGGAC GGCGTGTTCG CCCACAAGCG GTTGGCGATC
ATCGATGTGG CGTCCAGTCA CGAGCCGTTG CCCTACGCGG GCGGACGCTA CCTGCTGACC
TTCAACGGCG AGATCTACAA CTACATCGAG CTGCGGGAGG AGTTGGCCCG CGACTACGGG
GCGCAGTTCG CCACCTCCGG TGACGGGGAG GTGATCGTCG CCGGCTACCA CTACTGGGGT
GAGCAGGTGC TCAGCCGGCT GCGTGGCATG TTCGCCTTCG TGATCTGGGA CCGACAGGAA
CGGCGTGCGT TCGGTGCGCG CGACTACTTC GGCATCAAGC CGCTGCACTA TCTGGAGACG
GCCGACGGTC TCTACCTCGC CTCGGAAAAG AAGGCGCTGT TGCCGTTCGC GCCGGCCAAC
TACCACGGCG ACGCCGGCAT CGACACGGCC AGCCTCAGCC ACTACCTGAC CTTGCAGTAT
GTGCCGGAGC CCGGCACCCT GCACCAGGGG ATCCGTCGTA TCGGCTCGGG GGAGTACCTG
ACCTGGACTC CCGGTGGCCG GATCGATGTC CGTCGCTGGT ATCGGCCGGT GTTCCGACCC
GCCCCGGTGT CGGACGAGCA GAAGCTCTAC CACGAGATCC GGGAGAGACT GCGGGACAGC
GTCCGGATTC ACATGCGCTC GGATGTCCCG GTCGGTTCGT TCCTGTCCAG CGGGATCGAC
TCCACCGCCG TGGTGGCCCT GGCCCGGGAG TTCAACCCGA ACATTCTGAC CTTCACGGTC
GGCTACGACG TGCCCGGCTA CTCGGAGATC GACGTAGCCC AGGAGTCGGC CCGCCACCTG
GACGTCACCA CCATTCCCAC CAAGATCGGG CCGCAGGACA TGATGGCGGC GCTGCCGAAG
ATCGTCTGGC ACCTGGACGA CCCGGTCGCC GACCCGGCGC TGGTGCCGCT CTACTTCGTG
GCGCGTAAGG CCGCCGAACA CGTCACGGTG GTGCTCTCCG GCGAGGGCGC CGACGAGTTC
TTCGGCGGGT ACACGATCTA CCGGGAGCCA CTGTCGCTGA GCACGGTCAA CGGACTTCCC
GGCGGTGTGC AGAAGGGGCT GCGGGCGGTC TCGAAGGCGA TCCCGCAGGG GGTCAAGGGC
AAGAGCTTCC TGGAGCGCGG CACCACTCCC ATCGAGGCGC GTTACTACGG CAACGCCCGA
ATGTTCACCG AGGAGGAGAA ACAGCACCTG CTGCGCCGCT ACGACCCGTC GGTGCGCTAC
ACCGACATCA CCGCCCCGAT CTACGCCGAG TGCACCGAAC TCGACGACGT CACCAAGATG
CAGTACGTGG ACCTCTACAC CTGGCTGCGG GGCGACATCC TGGTCAAGGC CGACCGGATC
TCGATGGCGC ACTCGCTGGA GGTGCGGGTG CCGTTCCTCG ACCGGGAGGT CTTCGACGTG
GCGTCGAAGA TCCCGGTCGA CCTCAAGCTG CCCCCGCGCT CCGACGCCAC CAAGTACGCC
ATGCGCCAGG CGTTGCAGGG GGTGGTGCCT CCGGCCATCG TCAACCGCCG GAAGCTGGGC
TTCCCGACCC CGACTCGGGT GTGGCTGCGG GGTGAGATGT ACGAGTGGGC CCGGCACATG
CTGGCCACCT CCGGTGCCGG TGACCTGATC GACCTGTCGT ACGCGCTGCG GCTGCTCGAT
GAGCACAAGC GGGAGGAGGC CGACCACTCC CGCAAGGTAT GGACCGTGCT GATCTTCTGC
ATCTGGCATG CGATCTTCGT TGCCAAGACC CTCGACCCGG GGATCCAGCG CAACCAGTCG
GCCCTGCTGA CGAAGCCGGT GGTCGGCAGC ATGGTGCGCT GA
|
|---|
| Protein sequence | MCGLLAFFSA RGDAAAHRDH IAGALECLHH RGPDETGVEV VGDASGQYAD GVFAHKRLAI
IDVASSHEPL PYAGGRYLLT FNGEIYNYIE LREELARDYG AQFATSGDGE VIVAGYHYWG
EQVLSRLRGM FAFVIWDRQE RRAFGARDYF GIKPLHYLET ADGLYLASEK KALLPFAPAN
YHGDAGIDTA SLSHYLTLQY VPEPGTLHQG IRRIGSGEYL TWTPGGRIDV RRWYRPVFRP
APVSDEQKLY HEIRERLRDS VRIHMRSDVP VGSFLSSGID STAVVALARE FNPNILTFTV
GYDVPGYSEI DVAQESARHL DVTTIPTKIG PQDMMAALPK IVWHLDDPVA DPALVPLYFV
ARKAAEHVTV VLSGEGADEF FGGYTIYREP LSLSTVNGLP GGVQKGLRAV SKAIPQGVKG
KSFLERGTTP IEARYYGNAR MFTEEEKQHL LRRYDPSVRY TDITAPIYAE CTELDDVTKM
QYVDLYTWLR GDILVKADRI SMAHSLEVRV PFLDREVFDV ASKIPVDLKL PPRSDATKYA
MRQALQGVVP PAIVNRRKLG FPTPTRVWLR GEMYEWARHM LATSGAGDLI DLSYALRLLD
EHKREEADHS RKVWTVLIFC IWHAIFVAKT LDPGIQRNQS ALLTKPVVGS MVR
|
|---|
| |