Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3265 |
Symbol | |
ID | 5707552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3757400 |
End bp | 3757963 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641272692 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001538059 |
Protein GI | 159038806 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.145946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACG ACGACGTGGG TCGGCTGGTT CGTAGTGCTG CCAGTGGAGA TCGGGCAGCG TGGGAAGCCT TGGTCGACCG GTACGCGCGG CTGGTATACA CAGTGGCTCG CGGGTTCCGG CTCGACGACG CTGATGTCGC CGACGTCAGC CAGACGACCT GGTTGCGGCT CGTGGAGAAG CTTGACCAGC TCCGTGAACC GGGATCGGTG GGGGCATGGC TTGCCACCAC CGCTCGCCGG GAGGCCCTTG CCCTGCTGCG AAACAGGCGG GAAGTGTCGT TACCGGAGTC CACGAGATCG GAACCGGTGG ACGAGCTGCA GCCTGAGCCA TGGCAGCGGC TGGTTGCCGA GGAAACTGAT GCGGAGCTGT GGCATGCGTA CCGCAAACTG TCGTTACGCT GTCAGGAGTT ACTGCGGTTG CTGGTGTTCG AGCCTGTGGG CAGCTATGCG ATCGCTGCTG CGGCACTCTC GGTGCCCATC GGCAGTCTCG GCCCTGCCCG CGCCCGATGC CTGGCCACCC TTCGGGCCTT GCTGAATCAG CCCGCACCAC AGCGACGTAT CTAG
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Protein sequence | MSDDDVGRLV RSAASGDRAA WEALVDRYAR LVYTVARGFR LDDADVADVS QTTWLRLVEK LDQLREPGSV GAWLATTARR EALALLRNRR EVSLPESTRS EPVDELQPEP WQRLVAEETD AELWHAYRKL SLRCQELLRL LVFEPVGSYA IAAAALSVPI GSLGPARARC LATLRALLNQ PAPQRRI
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