Gene Sare_3265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3265 
Symbol 
ID5707552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3757400 
End bp3757963 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content65% 
IMG OID641272692 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001538059 
Protein GI159038806 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.145946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG ACGACGTGGG TCGGCTGGTT CGTAGTGCTG CCAGTGGAGA TCGGGCAGCG 
TGGGAAGCCT TGGTCGACCG GTACGCGCGG CTGGTATACA CAGTGGCTCG CGGGTTCCGG
CTCGACGACG CTGATGTCGC CGACGTCAGC CAGACGACCT GGTTGCGGCT CGTGGAGAAG
CTTGACCAGC TCCGTGAACC GGGATCGGTG GGGGCATGGC TTGCCACCAC CGCTCGCCGG
GAGGCCCTTG CCCTGCTGCG AAACAGGCGG GAAGTGTCGT TACCGGAGTC CACGAGATCG
GAACCGGTGG ACGAGCTGCA GCCTGAGCCA TGGCAGCGGC TGGTTGCCGA GGAAACTGAT
GCGGAGCTGT GGCATGCGTA CCGCAAACTG TCGTTACGCT GTCAGGAGTT ACTGCGGTTG
CTGGTGTTCG AGCCTGTGGG CAGCTATGCG ATCGCTGCTG CGGCACTCTC GGTGCCCATC
GGCAGTCTCG GCCCTGCCCG CGCCCGATGC CTGGCCACCC TTCGGGCCTT GCTGAATCAG
CCCGCACCAC AGCGACGTAT CTAG
 
Protein sequence
MSDDDVGRLV RSAASGDRAA WEALVDRYAR LVYTVARGFR LDDADVADVS QTTWLRLVEK 
LDQLREPGSV GAWLATTARR EALALLRNRR EVSLPESTRS EPVDELQPEP WQRLVAEETD
AELWHAYRKL SLRCQELLRL LVFEPVGSYA IAAAALSVPI GSLGPARARC LATLRALLNQ
PAPQRRI