Gene Sare_3197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3197 
Symbol 
ID5705632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3688221 
End bp3689153 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content69% 
IMG OID641272628 
Producthaloalkane dehalogenase 
Protein accessionYP_001537995 
Protein GI159038742 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0300138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTAC TGCGTACCCC GGACAACCGG TTCGACAACC TGCCCGACTT CCCCTACGAA 
CCCCAGTATG TCGACCTGGA CGGCATACGG ATGGCCTACG TCGAAGCCGG CCCAGCGGAC
GGGGAACCCG TGCTGCTGCT GCACGGTGAG CCCAGCTGGT CCTTCCTGTA CCGCAAGGTC
ATCCCGGTCC TCGCCGACGC CGGGTTGCGT GCCATCGCGC CGGACCTCAT CGGCTTCGGC
CGGTCCGACA AGCCAGCCAC ACGCGCGGAG CACAGCTACG CCCGGCACGT CGAGTGGGTA
CGCGGCTTCG CCTTCGACAA GCTGGGCCTG ACCGGGGTGA CGCTGGTCGG GCAGGACTGG
GGCGGTCTGA TCGGGCTTCG TCTGGTCGCC GAGCACCCGG ACCGGTTCGC CCGAGTGGTG
GCCGCCAACA CCGGGTTACC CACCGGCGAC CAGCCGATGC CGGACATCTG GTGGCAGTTC
CGGAAGGTGG TCGAGACGGC CCCCGAGCTG GAGGTGTCCC GCCTCGTGCA GATGGGCTGC
CTGAGCGAGC TGACCGCGGA GGCGCTGGCG GCCTACGACG CGCCGTTCCC GGACCAGTCC
TACCTCGCGG GTGTGCGCGC CATGCCTACC CTGGTGCCGA CCACGCCGGA CGACCCGGCC
ACCGGCGCCA ACCGCGCCGC CTGGACCGAA CTGTCCCGCT GGGACCGCCC GTTCCTGGTG
GCGTTCAGTG ACCAGGATCC GATCACGGCG GCGATGGCAC CAGTGCTTCG CAGCCTCGTG
CCGGGCGCTG CCGGAATCGA CCATCCCGTG ATCGAGGCAG CTGGGCACTT CCTTCAGGAG
GACGCCGGTG AACGGCTCGG CACGGTGGTC GCCGAGTTCG TCCGATCAAC TGTCGCAACT
GCGTCGCAAC CCGGGCAACA TCCCACCGAG TGA
 
Protein sequence
MSVLRTPDNR FDNLPDFPYE PQYVDLDGIR MAYVEAGPAD GEPVLLLHGE PSWSFLYRKV 
IPVLADAGLR AIAPDLIGFG RSDKPATRAE HSYARHVEWV RGFAFDKLGL TGVTLVGQDW
GGLIGLRLVA EHPDRFARVV AANTGLPTGD QPMPDIWWQF RKVVETAPEL EVSRLVQMGC
LSELTAEALA AYDAPFPDQS YLAGVRAMPT LVPTTPDDPA TGANRAAWTE LSRWDRPFLV
AFSDQDPITA AMAPVLRSLV PGAAGIDHPV IEAAGHFLQE DAGERLGTVV AEFVRSTVAT
ASQPGQHPTE