Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3197 |
Symbol | |
ID | 5705632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 3688221 |
End bp | 3689153 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641272628 |
Product | haloalkane dehalogenase |
Protein accession | YP_001537995 |
Protein GI | 159038742 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0300138 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTAC TGCGTACCCC GGACAACCGG TTCGACAACC TGCCCGACTT CCCCTACGAA CCCCAGTATG TCGACCTGGA CGGCATACGG ATGGCCTACG TCGAAGCCGG CCCAGCGGAC GGGGAACCCG TGCTGCTGCT GCACGGTGAG CCCAGCTGGT CCTTCCTGTA CCGCAAGGTC ATCCCGGTCC TCGCCGACGC CGGGTTGCGT GCCATCGCGC CGGACCTCAT CGGCTTCGGC CGGTCCGACA AGCCAGCCAC ACGCGCGGAG CACAGCTACG CCCGGCACGT CGAGTGGGTA CGCGGCTTCG CCTTCGACAA GCTGGGCCTG ACCGGGGTGA CGCTGGTCGG GCAGGACTGG GGCGGTCTGA TCGGGCTTCG TCTGGTCGCC GAGCACCCGG ACCGGTTCGC CCGAGTGGTG GCCGCCAACA CCGGGTTACC CACCGGCGAC CAGCCGATGC CGGACATCTG GTGGCAGTTC CGGAAGGTGG TCGAGACGGC CCCCGAGCTG GAGGTGTCCC GCCTCGTGCA GATGGGCTGC CTGAGCGAGC TGACCGCGGA GGCGCTGGCG GCCTACGACG CGCCGTTCCC GGACCAGTCC TACCTCGCGG GTGTGCGCGC CATGCCTACC CTGGTGCCGA CCACGCCGGA CGACCCGGCC ACCGGCGCCA ACCGCGCCGC CTGGACCGAA CTGTCCCGCT GGGACCGCCC GTTCCTGGTG GCGTTCAGTG ACCAGGATCC GATCACGGCG GCGATGGCAC CAGTGCTTCG CAGCCTCGTG CCGGGCGCTG CCGGAATCGA CCATCCCGTG ATCGAGGCAG CTGGGCACTT CCTTCAGGAG GACGCCGGTG AACGGCTCGG CACGGTGGTC GCCGAGTTCG TCCGATCAAC TGTCGCAACT GCGTCGCAAC CCGGGCAACA TCCCACCGAG TGA
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Protein sequence | MSVLRTPDNR FDNLPDFPYE PQYVDLDGIR MAYVEAGPAD GEPVLLLHGE PSWSFLYRKV IPVLADAGLR AIAPDLIGFG RSDKPATRAE HSYARHVEWV RGFAFDKLGL TGVTLVGQDW GGLIGLRLVA EHPDRFARVV AANTGLPTGD QPMPDIWWQF RKVVETAPEL EVSRLVQMGC LSELTAEALA AYDAPFPDQS YLAGVRAMPT LVPTTPDDPA TGANRAAWTE LSRWDRPFLV AFSDQDPITA AMAPVLRSLV PGAAGIDHPV IEAAGHFLQE DAGERLGTVV AEFVRSTVAT ASQPGQHPTE
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