| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3159 |
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| Symbol | |
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| ID | 5706108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 3643570 |
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| End bp | 3646476 |
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| Gene Length | 2907 bp |
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| Protein Length | 968 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641272591 |
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| Product | SARP family transcriptional regulator |
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| Protein accession | YP_001537958 |
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| Protein GI | 159038705 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000459834 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGCACTTCC GACTTCTCGG CCACATTGAG GTCGTTGACG ATGGGACGAG TTTGACGCTC
GGCGGCATCC GCGCCCGGGC GACGCTCGGC TATCTGCTGC TCAACCACAA CTCGGTGATC
CCGGTCAGCC GACTCATGAA GGCGTTGTGG CCCAACGGCA CCCCGGCTAC CGGACGCAAG
ATGCTGCATA ACGCCATCTC CCACCTGCGC GGCGTGATCG GTACGAACAG CATGACCGCG
CGGGCACCGG TGCTGCTGAC CCACGCGCCC GGCTACTTCC TGCGGGTGCA GGGGGAGTCG
GTGGACATGA TCTGTTTCAG GCAGCTGGTG GATGCTGCCC GGGGTGATCT CGCGGCGGGG
CGGTGGGAAC AGGCAGCCGA CACACTGCGC GGCGCACTTG CCCTCTGGCG CGGACCCGCG
ATGGTGGATC TGGTCGAGGC GGGGGTGAAC TGGGCTGAGC TGACCGCACT TGAAAATGAC
CGGCGGGCGG CGATCGAGTG TCTCGTCGAC GCGGATCTGG CCTTGGGCCG GCACGCGCAG
GTGATCAGCG AGCTGGAGAC GCAGCTGCAG GCCGGTCCGC TGCGGGAGCG GATGGCCGGG
CAGCTGATGC GGGCGCTCTA CCACTGCGGT CGACAGTCGG ACGCGCTCGC GCTCTACCAG
CGCACCCGGA CCGCTCTGAT CGAGGAGTTC GGCCTGGATC CCAGCCCGGA GCTGCAGCAG
CTGGAACGTG CCATCCTCAA CCATGCCCTC GTTGGGGGCA CGGCCGTGAG GCCGTCCGCC
GACCAGCCGG CCGAGCTGAT CGTTCATAGC GATTCGGCGT CGCCCCTGCC TTCCCGGCCT
GCCTCGGCTG GTCTGAACGC GGTACCCGAT GTCGCGTCCG ACCGGGTGGT GCCAGACACC
TCAGCCGAAG CGGAAGCATC GGTGTCCGCT GCGCTGACCG CGGTACCCGA TGTCGCGTCC
GACCGGGTGG TGCCAGACAC CTCAGCCGAA GCGGAAGCAT CGGTGTCCGC TGCGCTGACC
GCGGTACCCG ATGTCGCGTC CGACCGGGTG GTGCCAGACA CCTCAGCCGA AGCGGAAGCA
TCGGTGTCCG CTGCGCTGAC CGCGGTACCC GATGTCGCGT CCGACCGGGT GGTGCCAGAT
ACCTCAGCCG GAGCGGGCTC CTCGGCATCC ACAGTGGCTA CGGCCGCCGT TGCCAGCGAG
ATCAAGCAGG TCAGCATTGT GCTGGTCCGC GCTATCAAGG AGACGGCCGA GGCGTCGGAC
CCGGCCGCAG CGGCGCTGAC GCACGAGCGC ACTACCCGGG TTGTCGAGGC CGAGGCCGCG
CGGTGGGGCG GCACGATGGC CGGGACGTTG GGTTCGCTGT GGATGGTCGT CTTCGGGGTA
CCGGTCTCCG GGGAGTTCGA CGCCTGGCAT GCGGCACGGG CGGCCCGTAC CATCAGCCAC
CGCTTGACCC GACAACCGCC GAACGAGGAC GGGCCGGACG GCGACCCGTC CGGAGCGGTG
GTGGTCGCCA CCGGCAAGGC CCTCGTCCAA CCGTCGGGCG GGTCGCCGTC CGCAGTCAGC
GGGGCGGTGT TCGACCGGGC CATGGGCCAG CTCATCGCCG CTCGACCGGG CGAGGTGTCG
ATGTGCGAGC AGACGGCTGC CGCGGGTAGG ACCACCGAGC GTCGCACCCT GTCGCTGGTC
AATGTGCCGA CCGGCGGCGC CTCCGAGCCG TTCGTTGGTC GCGACCATGA CATGCGCGTC
CTCCAGCACG CCTGGGCCCA GGTGCGTCGG CTCCACCACC CGCATCTGGT GACCGTTCTT
GGACCAGCAG GGATGGGTAA GACCCGGCTG CTCGCCGAGT TCACCGGCCG AGCCGCAGGC
GCGGACCCAG CGGCGGAGTG CCTGATCGGT AGCTGTGCCC CGGCCGAGCC GGGCGGTACC
GGGTTCGACG CGCTGGCCGA TATCGTCAAG GCACGCTGCG GGGTTGCCAC GGACGGCAGT
GAGTCCCACA CGCGGGCCCG GCTCGCGTCG GCGGTCACCG GGCTGTCCGG GCTGAACCGG
CCGGACTGGG TGCTGGGCCA CCTGTGCGAC CTCGTTTTCG GCACGACCGA TGGCGGCGAG
GATGCGGTGT CCGCCTGGTG CTCCTTCCTG GAAGCGACCG TGGTCGAGCG CCCGGCCGTG
CTGGTTTTGG AGGATGCGCA CTGCGCTGCG GACGCGGTGC TCGACGTCGT CGACCAGCTG
GCCAGCTCGA CCGGGCCGCT GCTCACCGTG GTCACCGCCC GCCCGGAGGA GTTACTCGGC
CGGCGGCCCG GCTGGGGTGG CGGCAAACGC TACGCGAGTG CCACGGTCCT GCAGCCACTG
GACGACCGCG ACATACGTGA ACTGGCCGCC ACGCGCCTTG GCCGCCGTAA CCGGGACGGT
GCGCCCACTT TGGTCGACGC GGTGGTCACC AAGGCGGGCG GGAACCCGTT CTTCGCGCTG
GAGTTGGCTG CCACGCTGGC CGGCTCTGCG GACCGGCCGG TGAGCGCCGT ACAGCACGCG
ACCGGCAGCA CCTCGTTGTC CTTGAGCCTG CCCCCGGCCG TCCGTGCCGT GTTGGACGCG
CAGATCGACA CGTTGCCCCT GGTGGCCAAG ACTGTCCTGC TCGACGCGGT CGTGCTGGGT
GCGAGCTTCT GTGGCGGCGC CGTCGCTGCG ATAGGGTCGG CCTGCGCCGC GGATGTCGAG
CAGGGTTTGC GGCACCTCGA ACGCCTCGAC CTGGTGGCCC GCAACGGGCA GCTGTCACCG
GCAGGGCGGC CGGAGTACGA GTTCCGCATC AGCGCGCTGC GCGACGTGGC GTACGAACGC
CTGGTGCCCG CCGCCCGTGA GGAGAAGCAG CGGATCGTCG CTGGATGGCG GTTCCGGCTG
CCGGATTCGG ACAAGCTGGC CTCGTGA
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| Protein sequence | MHFRLLGHIE VVDDGTSLTL GGIRARATLG YLLLNHNSVI PVSRLMKALW PNGTPATGRK
MLHNAISHLR GVIGTNSMTA RAPVLLTHAP GYFLRVQGES VDMICFRQLV DAARGDLAAG
RWEQAADTLR GALALWRGPA MVDLVEAGVN WAELTALEND RRAAIECLVD ADLALGRHAQ
VISELETQLQ AGPLRERMAG QLMRALYHCG RQSDALALYQ RTRTALIEEF GLDPSPELQQ
LERAILNHAL VGGTAVRPSA DQPAELIVHS DSASPLPSRP ASAGLNAVPD VASDRVVPDT
SAEAEASVSA ALTAVPDVAS DRVVPDTSAE AEASVSAALT AVPDVASDRV VPDTSAEAEA
SVSAALTAVP DVASDRVVPD TSAGAGSSAS TVATAAVASE IKQVSIVLVR AIKETAEASD
PAAAALTHER TTRVVEAEAA RWGGTMAGTL GSLWMVVFGV PVSGEFDAWH AARAARTISH
RLTRQPPNED GPDGDPSGAV VVATGKALVQ PSGGSPSAVS GAVFDRAMGQ LIAARPGEVS
MCEQTAAAGR TTERRTLSLV NVPTGGASEP FVGRDHDMRV LQHAWAQVRR LHHPHLVTVL
GPAGMGKTRL LAEFTGRAAG ADPAAECLIG SCAPAEPGGT GFDALADIVK ARCGVATDGS
ESHTRARLAS AVTGLSGLNR PDWVLGHLCD LVFGTTDGGE DAVSAWCSFL EATVVERPAV
LVLEDAHCAA DAVLDVVDQL ASSTGPLLTV VTARPEELLG RRPGWGGGKR YASATVLQPL
DDRDIRELAA TRLGRRNRDG APTLVDAVVT KAGGNPFFAL ELAATLAGSA DRPVSAVQHA
TGSTSLSLSL PPAVRAVLDA QIDTLPLVAK TVLLDAVVLG ASFCGGAVAA IGSACAADVE
QGLRHLERLD LVARNGQLSP AGRPEYEFRI SALRDVAYER LVPAAREEKQ RIVAGWRFRL
PDSDKLAS
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