| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3002 |
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| Symbol | |
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| ID | 5707612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 3409991 |
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| End bp | 3410791 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641272449 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001537817 |
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| Protein GI | 159038564 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000526062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGACCACGC AGCCAACGGG CTCCCCCCGG GTCATCGTCG TCACGGGTGG GGCCGCCGGA
ATCGGCCGGG CAGTCGTGGA GCGCCTGGCA GCAACTGGTG ACACGGTCGT CGCCGTTGAT
CGCGACGAGG ACGCCCTGGG CGAGCTCGAC GACTCCTCCG GCACGTTCTC AGGGCGGGTG
GTCCCGCACG TCGCGGATGT CGCCGACGAC TCGTCCCTCG CCGCGCTGGG CGTCCGCCTA
CGCTCCGACT TCACACGCCT CAACGGGCTC GTCTGTGCCG CAGGGATCCA GCGCTACGGG
ACCGTCGTGG AGACGACCGC CGACCTGTTC GACGAGATCA TGGGCGTCAA CCTGCGGGGC
ACGTTCCTCA CCTGCCACCA CCTACTGCCA CTGATGCAGG GCGGCGGGGG GCAGGTCGTC
ATCGTGGCGT CCGTACAGGC ATACGCCGCC CAGCACGGCG TCGCCGCCTA CGCGGCGACC
AAGGGCGCAC TGCTGTCCCT CGCCAAGGCC ATGGCCGTGG ACCACGCGAC GGAGGGCATC
CGGGTCAACG CGGTATGCCC TGGTTCGGTG GACACGCCAA TGCTGCGGTG GGCCGCCACC
CTGTTCAGCG GGGACCAGCC AACCGACGAC GTGCTCGCCG ACTGGGGGCG CGCCCACCCT
CTCGGACGGG TGGCGCAGCC AGCGGAGGTC GCCGACGTCG CCGCCTTCCT GCTCAGCGAC
CAGGCGAGCT TCGTCACGGG CACGGACATT CGCGTCGACG GCGGGCTGAC CGCAGGGCTC
CCCGTCGCTT TGCCGAAGTA G
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| Protein sequence | MTTQPTGSPR VIVVTGGAAG IGRAVVERLA ATGDTVVAVD RDEDALGELD DSSGTFSGRV
VPHVADVADD SSLAALGVRL RSDFTRLNGL VCAAGIQRYG TVVETTADLF DEIMGVNLRG
TFLTCHHLLP LMQGGGGQVV IVASVQAYAA QHGVAAYAAT KGALLSLAKA MAVDHATEGI
RVNAVCPGSV DTPMLRWAAT LFSGDQPTDD VLADWGRAHP LGRVAQPAEV ADVAAFLLSD
QASFVTGTDI RVDGGLTAGL PVALPK
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