| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2955 |
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| Symbol | |
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| ID | 5707809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 3351680 |
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| End bp | 3353377 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641272404 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001537772 |
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| Protein GI | 159038519 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.836437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0528961 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGGCA TCCCGGGTCA CCCGCCCGGC CAACCGCGCA CGGCGGCCAC CACCCTCGTG
GCCGCCCTGC TCGGACACGA CGTCGACCGG GTGTTCTGCG TGGCCGGCGA GAGCTACCTG
GCGGTCCTCG ACGCCCTGTA CGACACCCCG ACCGTCGAGG TGGTGACCTG CCGGCACGAG
GCGTCGGCGG CGTTCGCCGC CGTCGCCGAC GCCAAGCTGA CTGGTCGGGC GGGTGTCTGC
CTGGTCAGTC GCGGCCCCGG GGCCACCAAC GCAGGCATCG CCGTGCACTC GGCCGCCCAG
GACGCCACCC CGCTGGTCCT GCTCGTCGGC CACGTGCCGC GGTCCGAGAT CGGCACCGAC
GCGTTTCAGG AGATCGACCC GCGCGCCTTC TCCGGTCTGG CCAAACAGGT ACTGGTGCTG
CTGGATCCGG CACGCACCGG CGAGTTCGTC GCCCGGGCCT TCCGGGTCGC CGAGGCCGGT
ACCCGCGGGC CGGTGGTGCT GGTTCTTCCC GAGGATGTCC TGGCCATGTC AGATCCGGTC
ACGCCAGTGC CCGCCCGCTG GGCGGCAGCC GCGCCGGTGG CCGCCGCCGA GGATCTACAG
GCGGTGCGGG CGCTGCTGGC ACGGTCACGA CGACCGTTGC TCGTGGCGGG CGGCGACCTC
TCCGGCGACC GGGGCCGGTG TCTGCTGCGC GAGGTGGCGC ACCGACACCG GTTTCCGGTG
GTGACCAGCA ACAAACGGCA GGACCTCCTC GACAACCGGG ACTCCTGCTA CGCCGGCCAT
CTGCACAACA ACACCCAGGA GAGGCAGATC GCGGCACTGG ATCGGGCGGA TCTCGTCCTG
GCGGTCGGAA CCCGGCTGGA CGACGTGACC ACGTGTGGCC GGCGGCTGCC GCGCCCCGGT
CGGCCCGATC AGCCGTTGGT GCATGTGCAC GCCGATCCGC AGCGGCTCGG GCGGACCCAC
CCGCCGGCCG TCGGGTTGGC CTGCGATCCG GTCGCCTTCC TCGGCCAACT GGCACTGGAG
CCCGCGTACC CGGACGCCGG CCGGGAGACC TGGATCGACG AGTTGCACGC GATCGAGGTC
GAGAAGGCCG TCTGGTCCGA GCATCCGAGC GACGACGGCG TCGCGTTCGG TGCCGTGGTC
GCCGGCCTCG ACGAGCTCAC CGACGGCGAC GTGGTCGTTG CCGTCGACTC CGGCACCTTC
ACCAGTTGGC TGTACCGCTA CCTGCGGCTG AGCGGCGAGG GGCGGATGCT CGGAGTCGGA
TCCAGCGCGA TGGGTTTCGG CGTCCCGGCC GGCGTGGCCG CTGCACTGCG GACACGCCGC
CCGGTCGTGG TGGTCGTCGG CGACGGCGGG TTCCTGATGA CGGGCAGCGA ACTGGCCACA
GCGGTGAGCC ACCGGCTGCC CCTGGTCGTT CTCGTCGCCA ACAACGGCAG CTACGGCACG
ATCCGCCTGC ACCAGGAACG GGAGTTTCCC GGGCGGGTCA TCGCCACCGA TCTGAGTAAC
CCCGACTTCG TCCAGCTCGC CCGCGCGTTC GGCGCGCTGG GCCTGATCGT GCAGGCCGAG
GAGGACGTCG AGCCCTGCCT GGCCCGGGCA CTCGCCCACG GGGGGCCGGT CGTGGTCGAC
GTACGGACCA GCCTGAGCTG GATCACCGCC TACCGACGGA TGCGAACGCG GGTGGCCGCG
GATGTGGGGT CGGCATGA
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| Protein sequence | MNGIPGHPPG QPRTAATTLV AALLGHDVDR VFCVAGESYL AVLDALYDTP TVEVVTCRHE
ASAAFAAVAD AKLTGRAGVC LVSRGPGATN AGIAVHSAAQ DATPLVLLVG HVPRSEIGTD
AFQEIDPRAF SGLAKQVLVL LDPARTGEFV ARAFRVAEAG TRGPVVLVLP EDVLAMSDPV
TPVPARWAAA APVAAAEDLQ AVRALLARSR RPLLVAGGDL SGDRGRCLLR EVAHRHRFPV
VTSNKRQDLL DNRDSCYAGH LHNNTQERQI AALDRADLVL AVGTRLDDVT TCGRRLPRPG
RPDQPLVHVH ADPQRLGRTH PPAVGLACDP VAFLGQLALE PAYPDAGRET WIDELHAIEV
EKAVWSEHPS DDGVAFGAVV AGLDELTDGD VVVAVDSGTF TSWLYRYLRL SGEGRMLGVG
SSAMGFGVPA GVAAALRTRR PVVVVVGDGG FLMTGSELAT AVSHRLPLVV LVANNGSYGT
IRLHQEREFP GRVIATDLSN PDFVQLARAF GALGLIVQAE EDVEPCLARA LAHGGPVVVD
VRTSLSWITA YRRMRTRVAA DVGSA
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