| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2810 |
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| Symbol | |
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| ID | 5707002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 3191532 |
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| End bp | 3193163 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641272266 |
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| Product | cholesterol oxidase |
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| Protein accession | YP_001537636 |
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| Protein GI | 159038383 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00131697 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGGTA CGAGCTTTTC CCGACGTGGC CTGCTACGGG CTACCACGCT CGGTGCCGGC
GCCGCCGTTG CCGGTGCCGC GTTAGCCCAG CGGGCAGCCG CGGCACAGGG TGTCGTGCCC
GCGCTGGCCG GCAAGACCGC CGTGGTCGTC GGCAGCGGCT TCGGCGGGGC GGTCGCCGCG
TACCGACTCG GCCAGGCCGG TGTGATCACC ACCGTGCTGG AACGCGGTCT CCGCTGGGAC
GTCGACGGCT CGGGCAACAC GTTCTGTGGC ATCAACGAGC CGGACTGGCG GTGCGGCTGG
TTCCTGGACC GTCCGCCGCT GGGCATCAAC CTCGGCGCAA GGATCGAACG TCGTGCCGGC
CTGATCGCCC GCCACGAAGG CGACGGAATC AATGTCCTCA GCGGTGTGGG GGTCGGCGGC
GGCTCCCTCG CGATCGGGAT GTTCCTACCG CAGCCGCGGC GCAGCGAGTG GGAGCAGGTG
TACCCGGCCG ACGTCGGCTA CGACGAGATG AACACCATCT ACTGGCCGCG AGCCCGGCAA
CGCCTCGGGG CCTCGCCGAT ACCAGAGGAC GTGCAGAGCA CAGGTCCGTA CCGGGGGGCC
CGAGCCTGGC TGGAGTACCT GTCGGAGTTC GACCAGAATC CCCTGTCCAT CCCGTTCGCC
GTCGACTGGG ACGTGATCCG TGCCGAACTC GCGGGTGACG CGGTGGCATG CCACACGATC
GGCGAGGGCC CGTACGGCAG CAACTCCGGG GCGAAGAACA GCGTGGACCG CAACTACCTG
GCCTGGGCCG CCGCTACCGG CAACGTGACG ACACTTCCCC TCCACGAGGT CACCGAGATT
CATGAGGTGT CCGGCCAGGA CAGGTTCGAG GTCAGGTGCC GACAGATCGA CGTGTACGGC
ACGGTCCTCG CCACCAGGAC CTTCGCCTGC GACTACCTGT TCCTGGCCGC CGGCTCCGTC
TACACCACCT CCCTGCTGCT CACCTCCCAG GCCAAGGGCT GGCTCCCCCG CCTGGTCAAC
CCGGAGGTGG GCAAGGGCTG GGGCAACAAC GGCGACTTCC TGGTAACCCG GATCAACCTG
CGCAAGGACG TCGGCTACGC CCAGGGCGGT CCGGGCAACG TGAAGTACAT CGACGACGAC
AACCCGTTCG CCCCCACGTC GATGGCGTGG GAGGCAGCGC CCGTCCCCAA CTGGATGCCA
CGCACCACCG CGCACCTGGT GACCAGCATG GCACCCGAAC GTGGCGAGAT CCGCTACGAC
GCGACGACCG GAGCCGCCAA GGTGCACTGG CCGTACGGGG TGCTGCAGAC CACCGCTGAA
AAGGCGGCGG TCAACCTGGT GACCCGGCTG TGGTGGCAGA CCGAGGGCCG TAAGGGATAC
CTGCTCAACG GCCTACCGAC CTACGCCCGG GGGGTCGGCA CCGGGCTCGG CGCGGCGAAC
ACCTGGCACC CGCTGGGCGG CATGGTCATG GGCGGGGCCA CCGACTTCGG GGGTCGCTGC
GTCGACTATC CCAACCTCTT CTGCGTCGAC GGGTCGATCC TGCCGGGATC GGCCTGCCTC
GCGAATCCTG CGCTGACCAT CACCGCCAAC GCCGAGCGTT GCCTGGACAG GTTCGTCGCC
GCGCACACCT GA
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| Protein sequence | MTGTSFSRRG LLRATTLGAG AAVAGAALAQ RAAAAQGVVP ALAGKTAVVV GSGFGGAVAA
YRLGQAGVIT TVLERGLRWD VDGSGNTFCG INEPDWRCGW FLDRPPLGIN LGARIERRAG
LIARHEGDGI NVLSGVGVGG GSLAIGMFLP QPRRSEWEQV YPADVGYDEM NTIYWPRARQ
RLGASPIPED VQSTGPYRGA RAWLEYLSEF DQNPLSIPFA VDWDVIRAEL AGDAVACHTI
GEGPYGSNSG AKNSVDRNYL AWAAATGNVT TLPLHEVTEI HEVSGQDRFE VRCRQIDVYG
TVLATRTFAC DYLFLAAGSV YTTSLLLTSQ AKGWLPRLVN PEVGKGWGNN GDFLVTRINL
RKDVGYAQGG PGNVKYIDDD NPFAPTSMAW EAAPVPNWMP RTTAHLVTSM APERGEIRYD
ATTGAAKVHW PYGVLQTTAE KAAVNLVTRL WWQTEGRKGY LLNGLPTYAR GVGTGLGAAN
TWHPLGGMVM GGATDFGGRC VDYPNLFCVD GSILPGSACL ANPALTITAN AERCLDRFVA
AHT
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