| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2801 |
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| Symbol | |
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| ID | 5706157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 3180844 |
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| End bp | 3181770 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641272257 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001537627 |
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| Protein GI | 159038374 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.164593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000184806 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACAGACC AGCAGTTCGC GTTGGATGGC ATGGTCGCGA TCGTGACCGG GGCGGGCAAC
GGCCTGGGTC GCGCCGAGGC CGTTGAGTTG GCAGCCAGCG GCGCCCGCCT CATCCTCAAC
GACCTTCCCG GCGACGCCGT GGCCGCCGTG GCCGCCGAGA TCGCGGCAGC GGGCGGCGAG
GCCACCGTGT GCACCGGCGA CATCGGGGAA TGGTCGACCG GTGAGTCCCT GCTGGGCGCA
GCCCTCGACA CGTACGGCAG GCTCGACATC CTGGTCAACA ACGCCGGCGT ACTCCGCGAC
CGGATGGTCT TCACGATGTC GGCGCAGGAA TGGGACCTCG TCCTGCGAGT GCATCTGCGC
GGTCACTTCG TGACCACCCG CCTGGCCACC GCCTACTGGC GCGAGCGGAG CAAGGAGCTC
GGCTCCCCGG TCTACGGTCG GATCATCAAC ACCTCCTCCG AGGCGTTCCT GCTCGGCTCA
CCCGGCCAGC CGAACTATGC TGCCGCGAAA GCCGGCATCG TGGCACTCAC CGTCGCGACC
GCGCGTAGCT GTGCTCGGTA CGGCATACGG GCAAATGTCA TCTGTCCACG AGCACGTACC
GCAATGACCG CCGACCTCAT GGGATCCACG CCCGAGGGGA CTGCCGATCC CCTGTCGCCA
GCCCATGTCG CACCGCTCGT GCGGTACCTG GCCAGCCCGG CGGGAGACCC GATCAACGGC
GAGGTCTTCG TGATCCACGG TGGCGTGGCA GCGGTACTGG CGCCACCCAC GGTGCGCGCG
AGCTTTCAGA CCGAGGAAGG ATCCTGGTCG CCGAAGGGCC TGCACGACGC CCTGGGCCCC
CTGTTCCAGC AGAGTCCGCC CGAGGCCGGG TTCGCCTGTC AGGCCACCCT GCCGCTGGCA
ACGACCACGT TCGGTGAAGG CAGGTGA
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| Protein sequence | MTDQQFALDG MVAIVTGAGN GLGRAEAVEL AASGARLILN DLPGDAVAAV AAEIAAAGGE
ATVCTGDIGE WSTGESLLGA ALDTYGRLDI LVNNAGVLRD RMVFTMSAQE WDLVLRVHLR
GHFVTTRLAT AYWRERSKEL GSPVYGRIIN TSSEAFLLGS PGQPNYAAAK AGIVALTVAT
ARSCARYGIR ANVICPRART AMTADLMGST PEGTADPLSP AHVAPLVRYL ASPAGDPING
EVFVIHGGVA AVLAPPTVRA SFQTEEGSWS PKGLHDALGP LFQQSPPEAG FACQATLPLA
TTTFGEGR
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