Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2724 |
Symbol | |
ID | 5704465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3105191 |
End bp | 3106738 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641272182 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001537552 |
Protein GI | 159038299 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.701538 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0103293 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTCAAC ACACGATCAC CAACCGTCCA TCGTCCCCTC CCGGCCACCG GCGGCGGCTG CCCTACCGGT ACTGGGTCGC CGTCGTCTAT GTGCTGGGCC TGTTCGTGGA GATCATGGAC ACCACGATCG TCAACGTGGC GGTTCCCGCC TTGGCCGCCG AGTTCGGGAC GACACCCATC CACACGCACT GGGCGGTGTT GGGCTACCTG CTGTCCCTGG CCCTGTTCAT ACCCGCTTCG GGCTGGATCG GTGACCGCTT CGGCACCAAG CGCGTCTTCC TCGTGGCCCT CGCCCTCTTC ACCGTGGCTT CGGCCTTGTG TGGCCTGGCC CAAACGCTGG ACCAGCTCAT CGCCTTCCGG ATCCTGCAGG GTGTGGGCGG TGGAATGCTG ACCCCGGTGG GCGGGGCCAT GCTGTACCGG GCCTTCCCAC AGTCGCAGCG AGCCAAGGCC GCCACTGCCG TGTTCGGCGT TGCCGTACTC GCGCCCGCCA TCGGCCCCGT GCTTGGCGGG TTGCTGGTCG ACACGGCGTC GTGGCGGTGG ATTTTCTACA TCAACATTCC CCTCGGCATC CTCACCGTGG CCCTGGCCGC CACCGTGTTG GTGGAGCATC GTGAGCCCCA CGCCCGCCGC TTCGACATTG CCGGGTTCGT GCTGGGGGGT ACGGCCCTCA CCACGACGCT CTATGGGCTG TCGCTCGGCC CGACGTTGGG ATGGACCTCA CCCACCATCG TGGCTGCCCT GATCTGCGCC CCGCTGGTGG CGGTCGCCTT CGTCATGGTC GAGCGCACCA GGTCCGAGCC CTTGGTGCAC GTGGCGCTGT TCAGGGATCC GATGTTCCGT ATCGGCAACA TCGCCGGCGG TTTCCTCATC GGGGGCTACC TTGGCCTGAT CTTCCTGCTG CCGTTGTTCC TCCAGGGGCC CCAGGGTCAA TCCGCACTCC ACAGCGGCCT GATCCTGCTA CCCCAGTCGG TCGGAGCCCT CGTCTCGTCG CAGATCGCCG GCCGTTGGTG GTACCGCCAC TACGGACCCC GCCCGCTCAT GGTGTACGGG GCGCTTCTGG CCGCGGCCAG TGGCGTCGCC TTCCTCGCCG TCGGGGCCGA CACCGACCCC CTGGTCACGG CCGCTTTACT GGGGCTACGG GGGCTGGCCA TCGGACCGGT GTTCATCGCC CTCCAGACCG CCACCTACGC CACCATCAGC CCGGCCGCGA CCGGGCAGGC CGTCGCCATC TACAACACCC AACGTCAGGT CAGCGCTGCG GTCGGTATCG CCCTGGGAGC GGCATGGCTC ACCGCCCGGA CCCCGGACAA GGCCGAGGGC GTCGATCCGG TGTCGGCCTT CCACGAATCC TTCGTGCTGG TCAGCATCCT CCTACTTGTC GGCGCGTTGA TTTCGGCCAG GATCAAGACC GCCGACGCTC GAGCCACCAT GGATCCGCCA CCCGAACCAC CTACCCGCAC GGCAGGAGAC GTGGCGGACC CGCCGGCGCG CCTATCCGCT CGTGAAGCGG GCGATGACGG CGCTCATCCA CCTCGCTCGA GCACGTGA
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Protein sequence | MAQHTITNRP SSPPGHRRRL PYRYWVAVVY VLGLFVEIMD TTIVNVAVPA LAAEFGTTPI HTHWAVLGYL LSLALFIPAS GWIGDRFGTK RVFLVALALF TVASALCGLA QTLDQLIAFR ILQGVGGGML TPVGGAMLYR AFPQSQRAKA ATAVFGVAVL APAIGPVLGG LLVDTASWRW IFYINIPLGI LTVALAATVL VEHREPHARR FDIAGFVLGG TALTTTLYGL SLGPTLGWTS PTIVAALICA PLVAVAFVMV ERTRSEPLVH VALFRDPMFR IGNIAGGFLI GGYLGLIFLL PLFLQGPQGQ SALHSGLILL PQSVGALVSS QIAGRWWYRH YGPRPLMVYG ALLAAASGVA FLAVGADTDP LVTAALLGLR GLAIGPVFIA LQTATYATIS PAATGQAVAI YNTQRQVSAA VGIALGAAWL TARTPDKAEG VDPVSAFHES FVLVSILLLV GALISARIKT ADARATMDPP PEPPTRTAGD VADPPARLSA REAGDDGAHP PRSST
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