Gene Sare_2724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2724 
Symbol 
ID5704465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3105191 
End bp3106738 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content68% 
IMG OID641272182 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_001537552 
Protein GI159038299 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.701538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0103293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTCAAC ACACGATCAC CAACCGTCCA TCGTCCCCTC CCGGCCACCG GCGGCGGCTG 
CCCTACCGGT ACTGGGTCGC CGTCGTCTAT GTGCTGGGCC TGTTCGTGGA GATCATGGAC
ACCACGATCG TCAACGTGGC GGTTCCCGCC TTGGCCGCCG AGTTCGGGAC GACACCCATC
CACACGCACT GGGCGGTGTT GGGCTACCTG CTGTCCCTGG CCCTGTTCAT ACCCGCTTCG
GGCTGGATCG GTGACCGCTT CGGCACCAAG CGCGTCTTCC TCGTGGCCCT CGCCCTCTTC
ACCGTGGCTT CGGCCTTGTG TGGCCTGGCC CAAACGCTGG ACCAGCTCAT CGCCTTCCGG
ATCCTGCAGG GTGTGGGCGG TGGAATGCTG ACCCCGGTGG GCGGGGCCAT GCTGTACCGG
GCCTTCCCAC AGTCGCAGCG AGCCAAGGCC GCCACTGCCG TGTTCGGCGT TGCCGTACTC
GCGCCCGCCA TCGGCCCCGT GCTTGGCGGG TTGCTGGTCG ACACGGCGTC GTGGCGGTGG
ATTTTCTACA TCAACATTCC CCTCGGCATC CTCACCGTGG CCCTGGCCGC CACCGTGTTG
GTGGAGCATC GTGAGCCCCA CGCCCGCCGC TTCGACATTG CCGGGTTCGT GCTGGGGGGT
ACGGCCCTCA CCACGACGCT CTATGGGCTG TCGCTCGGCC CGACGTTGGG ATGGACCTCA
CCCACCATCG TGGCTGCCCT GATCTGCGCC CCGCTGGTGG CGGTCGCCTT CGTCATGGTC
GAGCGCACCA GGTCCGAGCC CTTGGTGCAC GTGGCGCTGT TCAGGGATCC GATGTTCCGT
ATCGGCAACA TCGCCGGCGG TTTCCTCATC GGGGGCTACC TTGGCCTGAT CTTCCTGCTG
CCGTTGTTCC TCCAGGGGCC CCAGGGTCAA TCCGCACTCC ACAGCGGCCT GATCCTGCTA
CCCCAGTCGG TCGGAGCCCT CGTCTCGTCG CAGATCGCCG GCCGTTGGTG GTACCGCCAC
TACGGACCCC GCCCGCTCAT GGTGTACGGG GCGCTTCTGG CCGCGGCCAG TGGCGTCGCC
TTCCTCGCCG TCGGGGCCGA CACCGACCCC CTGGTCACGG CCGCTTTACT GGGGCTACGG
GGGCTGGCCA TCGGACCGGT GTTCATCGCC CTCCAGACCG CCACCTACGC CACCATCAGC
CCGGCCGCGA CCGGGCAGGC CGTCGCCATC TACAACACCC AACGTCAGGT CAGCGCTGCG
GTCGGTATCG CCCTGGGAGC GGCATGGCTC ACCGCCCGGA CCCCGGACAA GGCCGAGGGC
GTCGATCCGG TGTCGGCCTT CCACGAATCC TTCGTGCTGG TCAGCATCCT CCTACTTGTC
GGCGCGTTGA TTTCGGCCAG GATCAAGACC GCCGACGCTC GAGCCACCAT GGATCCGCCA
CCCGAACCAC CTACCCGCAC GGCAGGAGAC GTGGCGGACC CGCCGGCGCG CCTATCCGCT
CGTGAAGCGG GCGATGACGG CGCTCATCCA CCTCGCTCGA GCACGTGA
 
Protein sequence
MAQHTITNRP SSPPGHRRRL PYRYWVAVVY VLGLFVEIMD TTIVNVAVPA LAAEFGTTPI 
HTHWAVLGYL LSLALFIPAS GWIGDRFGTK RVFLVALALF TVASALCGLA QTLDQLIAFR
ILQGVGGGML TPVGGAMLYR AFPQSQRAKA ATAVFGVAVL APAIGPVLGG LLVDTASWRW
IFYINIPLGI LTVALAATVL VEHREPHARR FDIAGFVLGG TALTTTLYGL SLGPTLGWTS
PTIVAALICA PLVAVAFVMV ERTRSEPLVH VALFRDPMFR IGNIAGGFLI GGYLGLIFLL
PLFLQGPQGQ SALHSGLILL PQSVGALVSS QIAGRWWYRH YGPRPLMVYG ALLAAASGVA
FLAVGADTDP LVTAALLGLR GLAIGPVFIA LQTATYATIS PAATGQAVAI YNTQRQVSAA
VGIALGAAWL TARTPDKAEG VDPVSAFHES FVLVSILLLV GALISARIKT ADARATMDPP
PEPPTRTAGD VADPPARLSA REAGDDGAHP PRSST