Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2536 |
Symbol | |
ID | 5706858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 2889941 |
End bp | 2891089 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641271999 |
Product | geranylgeranyl reductase |
Protein accession | YP_001537369 |
Protein GI | 159038116 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000189662 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACCGTCT GGGATCTCGC GGTGGTGGGT GCGGGCCCTG CCGGCCTGTC CGCCGCCTAC GTCGCGGCAC GGGCGGGTGT GGACACCGTC GTGCTGGAGC GGGCCGTGCA CCCGCGTTAC AAGACCTGTG GCGGTGGCCT GATCGGCACG TCCCTGGCCG TGGTGGCGGA CCGTATCGAG GTGCCCGCGC ACGACCGGGC GGACCGGGTC ACCTTCACCT GGTCCGGCCG GCGGGCATTC ACCCGTCGGA GCGCGGGTGG TCCGTTGGTC ACGATGGTGC GCCGCGATGA GTTCGATGAT CGGCTGCGGG CCGCCGCGGT CGCCGCGGGG GCGACGCTGC GCCAGCGTGT CGCGGTCCGC TCGGTGGAGC CGGAGCCCGA CGGGGTACGC CTGCGGCTGG TCGACGGGAC GACGGTGACC GCACGTTCGG TGATCGGGGC CGACGGGTCC TCGGGGGTGA CCGCGCGACA CGTGGGGGTG CGCCACCGTC AGGTCGATCT GGGACTGGAG CTGGAGCTGC CGGTGCCACC GGCCCTACAG GCCCGCTGGC GGGGCCGGGT GCTGGTGGAC TGGGGCCCGT TGCCCGGCTC GTATGCCTGG GTGTTTCCGA AGAACGACCT GTTGACGGTG GGGGTGATCG CGGCGCGCGG GGCGGGGGAG CGAACCCGGG CGTACCTGCG GTCGTTCGTG GACCGACTGG GCCTCGCCGA CGTCGAGCCG GTCCACGACT CCGGCCATCT GACCCGGTGC CGGCAGGAGG GGTCGCCGTT GCGCCGTGGG CGGGTGCTGG TGGCTGGGGA TGCGGCCGGG CTGCTGGAAC CGTGGAGCAG GGAGGGGATC AGCTACGCCC TGCGGTCTGG CGAGCTGGCC GGTGCGGCGG TCGCCGCCGA CGACCTGGGC CAATACGAGC CGGCGGTCGT GGCGGAGTTG GTCCCGTCGA TGCGGGCGGG CCAACGCCTG CTGCACATCT TCAGCCGCCG CCCGGGGGTG TTCCACGGGC TGCTGGCGAC GCCGCCGGGT TGGCGGACCT TCGTCGCCTT CTGCGAGGGT CGGGCTGGGT TCGACGAACT GCTTTCCCGA GTGCCGGTGC GGGTGGCGTT GGCCTTGCTG GACGGGCTGC CCTGCCGGAG ACGTTCTTCC TTGCCTTGA
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Protein sequence | MTVWDLAVVG AGPAGLSAAY VAARAGVDTV VLERAVHPRY KTCGGGLIGT SLAVVADRIE VPAHDRADRV TFTWSGRRAF TRRSAGGPLV TMVRRDEFDD RLRAAAVAAG ATLRQRVAVR SVEPEPDGVR LRLVDGTTVT ARSVIGADGS SGVTARHVGV RHRQVDLGLE LELPVPPALQ ARWRGRVLVD WGPLPGSYAW VFPKNDLLTV GVIAARGAGE RTRAYLRSFV DRLGLADVEP VHDSGHLTRC RQEGSPLRRG RVLVAGDAAG LLEPWSREGI SYALRSGELA GAAVAADDLG QYEPAVVAEL VPSMRAGQRL LHIFSRRPGV FHGLLATPPG WRTFVAFCEG RAGFDELLSR VPVRVALALL DGLPCRRRSS LP
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