| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2482 |
|---|
| Symbol | |
|---|
| ID | 5706087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 2839580 |
|---|
| End bp | 2840992 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641271946 |
|---|
| Product | cytochrome bd ubiquinol oxidase subunit I |
|---|
| Protein accession | YP_001537316 |
|---|
| Protein GI | 159038063 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0810275 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACGCGT TAGACGTCGC CCGTTGGCAG TTCGGTGTCA CCACCGTCTA CCACTTCCTA
TTCGTGCCGC TAACCATCGG CCTGTCCGTC CTGGTCGCCA TCCTCCAGAC ACTCTGGCAC
CGCACCGGCG ACGAGAAGTA CCTCAAACTC ACCAAGTTCT ACGGCAAACT CTTCCTGATC
AACTTCGCGA TGGGCGTGGT CACCGGCATC GTGCAGGAAT TCCAGTTCGG CATGAACTGG
AGCGACTACT CCCGCTTCGT CGGTGACATC TTCGGCGCAC CACTGGCCAT CGAAGCCCTG
GTCGCCTTCT TCCTCGAATC CACCTTCATC GGCCTATGGA TCTTCGGCTG GGACCGACTA
CCCAAACGCC TACACCTGGC CAGCATCTGG GCCGCCGCCA TCGGCACCAA CCTGTCGGCC
TACTTCATCC TCGCCGCGAA CTCGTTCATG CAAAACCCGG TCGGCTACCA GATCAACCCC
GACACCGGCC GCGCCGAACT GACCGACTTC GTCGCCGTCC TGACGAACAA GGTCGCCCTG
ATCACCTTCC CGCACACCAT CGCCGGCGCC TTCCTCGTCG CCGGCTCCCT CCTCGTCGCC
GTTGCCCTGT GGCACCTCAT CCGCAACCAG GACTCGCCGG ACACCCCCGC CTACCGCTTC
GCCGCCAAGT TCGGATCCTG GGTCACCCTG ATCTCCACCG CCGCCGTCCT GATCACCGGC
GACATCCAGG GCAAGATCAT GACCCAGGTG CAGCCCATGA AGATGGCCGC AGCCGAAGGT
CTCTACCACA CCGAGAGCCC CGCCTCGTTC TCCGTACTCA CCATCGGCAG CCTCGACGGC
AGCCGCGAAC TGTTCGCCCT GAAGATCCCC TACCTGCTGT CGTACCTGGG CACCGGCGAC
CCCAACGGCA CCGTGCACGG CATCAACGAC CTCCAGGCCC AGTACACCGC CCAGTACGGC
GCCGGCAGCT ACACCCCGAT CATCCCGATC ACCTACTGGA GCTTCCGGCT GATGATCGCC
TTCGGGCTGG CCGCCGCCGC CATCGCCCTC CTGGTGCTCT GGAGCCAGCG CAAGGGCCGC
ACCCCCACCA GCCGATGGCT GCTCCGCGCC GGCCTGGTCA TGCCCCTGCT ACCCCTGGCC
GCGAACTCCT TCGGCTGGAT CTTCACCGAG ATGGGCCGCC AACCGTGGAT CGTCTTCGGT
GAGATGCTCA CCCGCGACGG CGTCTCCCGC AGCGTGTCAC TCACCGAAGT CCTCACCTCC
TTCACCGCCT TCACCCTCAT CTACGCCGCC CTCGCCGTCA TCGAGTTCAA ACTGCTCATC
CGCTACGCCA AGGCCGGCGT ACCCGACCTC ACCCCAGACC CCGAACCCGA CGACACCGAC
GACGCCGAGC GCCCGCTCGC CTTCGCCTAC TGA
|
|---|
| Protein sequence | MDALDVARWQ FGVTTVYHFL FVPLTIGLSV LVAILQTLWH RTGDEKYLKL TKFYGKLFLI
NFAMGVVTGI VQEFQFGMNW SDYSRFVGDI FGAPLAIEAL VAFFLESTFI GLWIFGWDRL
PKRLHLASIW AAAIGTNLSA YFILAANSFM QNPVGYQINP DTGRAELTDF VAVLTNKVAL
ITFPHTIAGA FLVAGSLLVA VALWHLIRNQ DSPDTPAYRF AAKFGSWVTL ISTAAVLITG
DIQGKIMTQV QPMKMAAAEG LYHTESPASF SVLTIGSLDG SRELFALKIP YLLSYLGTGD
PNGTVHGIND LQAQYTAQYG AGSYTPIIPI TYWSFRLMIA FGLAAAAIAL LVLWSQRKGR
TPTSRWLLRA GLVMPLLPLA ANSFGWIFTE MGRQPWIVFG EMLTRDGVSR SVSLTEVLTS
FTAFTLIYAA LAVIEFKLLI RYAKAGVPDL TPDPEPDDTD DAERPLAFAY
|
|---|
| |