Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2404 |
Symbol | |
ID | 5703688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 2759899 |
End bp | 2760846 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641271882 |
Product | periplasmic binding protein |
Protein accession | YP_001537253 |
Protein GI | 159038000 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4607] ABC-type enterochelin transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0899785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00440693 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGGTTTC CCCTTCTTCA GGTCGGTCTC GCCACCACCC TCGCCCTGAC ATTGACCGCC TGCGGCGGCG AAGCGGGAGG GTCGGCCGAC TCGACGGCAG CGGACGAGCG CACCGTGGTC ATCGAACACG CACAGGGTTC GACCACGGTG CCGGTCAACC CCCAGAAGGT CATCACGTTC GACCTGGCGA GCCTGGACAC ACTCGACACG CTCGGTGTCC CGGTGACGGG AGTAGCCAAG GGCAATCTGC CGTCCTATCT CGACAAGTAC AACGGTGACG AGTATGTCAA CGCGGGCACC CTGTTCGAGC CCGACTTCGA AGCCGTCAAC GCCGCCGAGC CGGACCTGAT CGTCGTGGCG AACCGTTCGG CGAAGGCCTA CGGCGAGCTG AGCAAGATCG CCCCCACCGT CGACCTGACC CTCGACTGGA CGAGCTTCAA GTCCAGCTTC GTGACGAACA CCGAGAAGCT GGGAACGATC TTCGACAAGC AGGATGAGGT CACAGCAGCA CTCGCCGACA TCGACACGAA GATCAGCAAG GCAGAAGAGA GCGCCACTGA CGCAGGTCGT GGCCTGATCG TGCTCACCAG CGCCGGCGAG GTCACCGCAT TCGGACCAGG TTCCCGCTTC GGCTGGCTGC ATGACGAATT CGGCGTGACG CCCGCCATCG CCGATGTCGA GGCCGCGACC CACGGTGACC CTGTCTCGTT TGAGTTCATC CTGAAGACCA ACCCCGACTG GCTCTTCGTC GTCGACCGGG ACGCGGCCAC CGGTGAGGGC ACGAAGACCG CGCAGGAGGT TCTCGACAAC GAGGTCGTCG CCAGGACCAC CGCCTGGTCC AAGCAGCAGG TCGTCTACCT CGACCCGGCG CCGTGGTACA TCGTGATGAG TGGACTGACC GCCGTGAACC AGATGATCGA CCAGGTCACC ACCGGCCTCA CCAAGTGA
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Protein sequence | MRFPLLQVGL ATTLALTLTA CGGEAGGSAD STAADERTVV IEHAQGSTTV PVNPQKVITF DLASLDTLDT LGVPVTGVAK GNLPSYLDKY NGDEYVNAGT LFEPDFEAVN AAEPDLIVVA NRSAKAYGEL SKIAPTVDLT LDWTSFKSSF VTNTEKLGTI FDKQDEVTAA LADIDTKISK AEESATDAGR GLIVLTSAGE VTAFGPGSRF GWLHDEFGVT PAIADVEAAT HGDPVSFEFI LKTNPDWLFV VDRDAATGEG TKTAQEVLDN EVVARTTAWS KQQVVYLDPA PWYIVMSGLT AVNQMIDQVT TGLTK
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