Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2396 |
Symbol | |
ID | 5703888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2752547 |
End bp | 2753035 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641271874 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001537245 |
Protein GI | 159037992 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.371515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000671119 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACGCGTC GCACACCAAG GCCGCCTACT GGCCTTCCAG ATGGTAAGTC GCTGCTCGAC GACACCAATC GTCGCCTGCT CCGTGTCCTG CGCGAGGACC CACGGGCCAG CGCCGCCGAG TTGGCCCGGC GGGTCGGCAT GTCCGCTCCC GCGGTGCGGG AGCGCCTCAG CCGGCTCGAG CAAGCCGGTG TCATCCTCGG CTACCGCGTG GACATCGACC CCGCCGCTCT GGGCCTGCCC GTCGCCGCCT GGGTCCGGAT CCAACCCGGG CCAGGACAGC TACCGAAGAT CGCGGACCTG GCTGCTCGCA CTCCCGAGGT CAGCGAGTGT CATCGGATCT CCGGCGAAGA CTGCTTCCTG CTCAAGGTGC ACGTACCTGC CATCGGTGCC CTAGAAGCCG TCCTCGACCG GTTTCTGCTT CACGGCCAGA CCACCAGTTC CTTCATCGTG TCCACACCGG TGACGCCCCG CACGCCCGGT CAGGGCTAG
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Protein sequence | MTRRTPRPPT GLPDGKSLLD DTNRRLLRVL REDPRASAAE LARRVGMSAP AVRERLSRLE QAGVILGYRV DIDPAALGLP VAAWVRIQPG PGQLPKIADL AARTPEVSEC HRISGEDCFL LKVHVPAIGA LEAVLDRFLL HGQTTSSFIV STPVTPRTPG QG
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