Gene Sare_2396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2396 
Symbol 
ID5703888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2752547 
End bp2753035 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content68% 
IMG OID641271874 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001537245 
Protein GI159037992 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.371515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000671119 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACGCGTC GCACACCAAG GCCGCCTACT GGCCTTCCAG ATGGTAAGTC GCTGCTCGAC 
GACACCAATC GTCGCCTGCT CCGTGTCCTG CGCGAGGACC CACGGGCCAG CGCCGCCGAG
TTGGCCCGGC GGGTCGGCAT GTCCGCTCCC GCGGTGCGGG AGCGCCTCAG CCGGCTCGAG
CAAGCCGGTG TCATCCTCGG CTACCGCGTG GACATCGACC CCGCCGCTCT GGGCCTGCCC
GTCGCCGCCT GGGTCCGGAT CCAACCCGGG CCAGGACAGC TACCGAAGAT CGCGGACCTG
GCTGCTCGCA CTCCCGAGGT CAGCGAGTGT CATCGGATCT CCGGCGAAGA CTGCTTCCTG
CTCAAGGTGC ACGTACCTGC CATCGGTGCC CTAGAAGCCG TCCTCGACCG GTTTCTGCTT
CACGGCCAGA CCACCAGTTC CTTCATCGTG TCCACACCGG TGACGCCCCG CACGCCCGGT
CAGGGCTAG
 
Protein sequence
MTRRTPRPPT GLPDGKSLLD DTNRRLLRVL REDPRASAAE LARRVGMSAP AVRERLSRLE 
QAGVILGYRV DIDPAALGLP VAAWVRIQPG PGQLPKIADL AARTPEVSEC HRISGEDCFL
LKVHVPAIGA LEAVLDRFLL HGQTTSSFIV STPVTPRTPG QG