| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2350 |
|---|
| Symbol | |
|---|
| ID | 5706934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 2703567 |
|---|
| End bp | 2706116 |
|---|
| Gene Length | 2550 bp |
|---|
| Protein Length | 849 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641271828 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001537199 |
|---|
| Protein GI | 159037946 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[V] Defense mechanisms |
|---|
| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component
[COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.112042 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.313375 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCGGG CGACCCTCAA GAGCCTGCTG GCGCGCAAGC TCAGGCTGAT CCTGTCCGGG
TTGGCGGTGG TGCTCGGCGT CATGTTCGTC TCGGGCGCGT TCGTGCTCAC CGACACCCTC
GGCAGGTCCT TCGACGCGGC CTTCGCCGAC GCGTACGAGG GGGTGGACGT CAACGTCGCC
GCGAAGCCGA AGGTGGAGTT GAGCGACTTC GAGGGCGGGC AGGTGCTGGC ACCGGTGCCG
GCCGCGGAGC TGGAGCGGGT CCGAGCCGTC GATGGGGTGG CCGACGCCAC GGGCGTCGTG
GCCGCCGACG GCGCCCGCCT GATCGGCAGC AACGGCAAGG TGGTCACCAC CTTCGGACCG
CCCCAACTCG GTGAGAACTG GGTGGGCGTG AGTGATCTCG TGCAGCTGCG CGAGGGCCGG
GAACCGCAGG CGGACGACGA GATCGTCGTC AACGCCGGCC TGGCCAAGGC CGGTCGGGTC
GCCGTCGGCG ACCAGGTGGG CGTGCTCACG CTCGAGCCGA AGCAGGAGTT CACCATCGTC
GGGGTCTTCG GCTACAGCGG AGACCGCGAC TCCATCGGCG GGGTCAACGA GATCATGTTC
ACCACCCCGG TGGCACAGCA GTTGATGCTC GGCCAGCGCG ACGTCTTCAC CAACATCACG
GTCGCCGCCG CCGACGGCGT GTCGAACGAT CGGCTGCGCG ACGACATCGC CGCCGTGCTC
GGGGCCGACT TCGAGGTGAA GACCGGGGCA CAACTCTCCG CCGACGCATC GGCGGGTCTG
AAGGAGGGGC TGTCCTTCTT CAACCGAATC CTGCTCGGCT TCGCCGCGGT GGCGCTCCTG
GTGGGCACGT TCCTGATCCT CAACACCTTT TCGATCATCG TGGCCCAACG CACGCGGGAA
CTGGCGCTGA TGCGCGCCGT CGGGGCGGGC CGCCGCCAGA TCATCGGCTC GGTGGTACTG
GAGGCGGTGG CGGTCGGCCT GCTCGCCTCC GTGCTCGGCC TCGGCGCCGG CGTCGGTGTC
GGCGCGTTGT TGGCGTACGT GTTCGGCAGC ATCACCGGTG GGCTGGACCT GGCGGGGATC
GCGGTACCAC CGGCGGCGGT GATCGGAGCG TTCGGTGTCG GTCTGGTCAT CACGGTGGTG
GCGGCGCTGC TACCCGCGCT GCGGGCGGCA CGGATTCCGC CGATCGCCGC GATGCAGGAC
GTCGCGACGC CGGACCGGCC GCTGACCAAG GTCACGGTTG CTGGCGCGGC GGTGACCTCG
ATCGGTGCCA CCCTGTTGTT CCTGGGGCTC GGCGGGCACA CCGGCGACGG CTCCCTGATG
ACGATCCTCG GCGGGGTGCT GTTCGCCTTC ATCGGGGTGG CGCTGCTGAC CCCACTGGTC
AGCCGGCCGG TGGTCGGTCT GCTCGGCGGG CTTTTCTCCT GGTGGATGCC CGGCAAGCTG
GGCCGGCTCA ACTCCGGGCG CAACCCGCGC CGTACGGCGA TCACGGCGGC GGCGCTGATG
GTCGGTATCG CCCTGGTCAC CGGTGTCACC GTCATCCTGG ACTCGGCCAA GAGCAGCATC
AGTGGCCTGG CCCAGGACAG GATCAAGGCC GAGTTGGTGA TCGCCGGTGC GCAGACCGGC
GCTCGGCCGC CGAGCTTCGA CTCGGCGGTG CTGGCGGAGT CCGCGGCGAT CCCCGGGGTG
GCGCTGGTCG GTGGCGTCTA CGGTGACCTG GCCCAGGTCG GCGATGAGCG CACCTGGGTA
GGTGCCAACA GCGACGTGTC GACACTGGCG AAGATCTTCG GCGCGAAGGC CACTGCCGGG
GACATCAGCC GACTCGGGCC GGACCAGATG CTGGTCAGTT CAGACGTGGC GGCCGCACGC
GGGCTGTCCG TCGGCTCCAC CGTGCCGGTG CAGTTGGCTC GCGCCGATGC GAAGACCTAC
ACGGTCAGCG GCATCTACGA AAGCGACGAG TTCCTCGACC CGGTCACCCT GCCGGTGGAG
GCGGCGCAGG GCTTCACCAT CCCCCAGCCG ATCACGGGCT TCATCCAGCT CGGGCCCGGC
ACCCAGGCGG ACGACGTACT GCCGCGGGTG GAGGCGCTCC TGGCGGACAG CCCGGAAGTG
TCCGTGGCCG ACCGGGACGC GTTCATTCAG CAGCAGACCA GCCAGCTCGA CGGCCTGCTC
CAGATGATCC AGATCCTGCT GCTGTTGGCC ATCGTGATCG CGGTGCTCGG CATCATCAAC
ACACTCGCCC TGTCCGTGCT CGAACGCACC CGGGAACTGG GGTTGCTGCG GGCGGTCGGG
CTGGGCCGCG GGCAGACCAT GGGCATGATC ACCGTAGAGG CCGTGGTGAT CTCGGTGTTT
GGCGCGCTGC TCGGCATCAC CGTCGGCTCC GGCCTCGGTG CGGCCGTCGT CGAGGCGTTG
CACGACGAGG GGATCACCGA CCTGGTGTTG CCCTGGGCGG ACATGGGGGT GATGGTCGGT
CTCGGCGCGT TCGTCGGCGT CCTCGCCGCC GTGATCCCGG CGGTCCGTGC CGCCCGCATC
GACGTCCTGG GCGCCATCGC CCACGACTGA
|
|---|
| Protein sequence | MFRATLKSLL ARKLRLILSG LAVVLGVMFV SGAFVLTDTL GRSFDAAFAD AYEGVDVNVA
AKPKVELSDF EGGQVLAPVP AAELERVRAV DGVADATGVV AADGARLIGS NGKVVTTFGP
PQLGENWVGV SDLVQLREGR EPQADDEIVV NAGLAKAGRV AVGDQVGVLT LEPKQEFTIV
GVFGYSGDRD SIGGVNEIMF TTPVAQQLML GQRDVFTNIT VAAADGVSND RLRDDIAAVL
GADFEVKTGA QLSADASAGL KEGLSFFNRI LLGFAAVALL VGTFLILNTF SIIVAQRTRE
LALMRAVGAG RRQIIGSVVL EAVAVGLLAS VLGLGAGVGV GALLAYVFGS ITGGLDLAGI
AVPPAAVIGA FGVGLVITVV AALLPALRAA RIPPIAAMQD VATPDRPLTK VTVAGAAVTS
IGATLLFLGL GGHTGDGSLM TILGGVLFAF IGVALLTPLV SRPVVGLLGG LFSWWMPGKL
GRLNSGRNPR RTAITAAALM VGIALVTGVT VILDSAKSSI SGLAQDRIKA ELVIAGAQTG
ARPPSFDSAV LAESAAIPGV ALVGGVYGDL AQVGDERTWV GANSDVSTLA KIFGAKATAG
DISRLGPDQM LVSSDVAAAR GLSVGSTVPV QLARADAKTY TVSGIYESDE FLDPVTLPVE
AAQGFTIPQP ITGFIQLGPG TQADDVLPRV EALLADSPEV SVADRDAFIQ QQTSQLDGLL
QMIQILLLLA IVIAVLGIIN TLALSVLERT RELGLLRAVG LGRGQTMGMI TVEAVVISVF
GALLGITVGS GLGAAVVEAL HDEGITDLVL PWADMGVMVG LGAFVGVLAA VIPAVRAARI
DVLGAIAHD
|
|---|
| |