| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2341 |
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| Symbol | |
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| ID | 5707969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 2693827 |
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| End bp | 2695227 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641271819 |
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| Product | glutamate decarboxylase |
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| Protein accession | YP_001537190 |
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| Protein GI | 159037937 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | [TIGR01788] glutamate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0367356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0856253 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAACA CCCGGCGAAG TATCGACTCC TTCGGTCCTG GCGTGGTCGG ACTGAACCCG
ATGTTCGCGC GTCCGGGTGA GGCGACTGAG CTTGCCCGAT TCTCGATTCC GGACGACGAG
TCGCTACCGG AAACCGCATA CCAGATCGTG CACGACGAGG TGGCCCTCGA CGGGAACGCA
CGGCTCAACC TCGCCACGTT CGTCGGCACC TGGATGGACA GCCATGCCGA GAAGTTGTTC
GCCGAGACGT TCGACAAGAA TCTGATCGAC AAGGACGAGT ATCAGGCTAC CGACGTCATT
GAGACCCGGT GCCGGACCAT CCTGGCGGAT CTCTGGCACG CGCCCGAGCC CCGGAACGCC
GTCGGCACGT CCACGATCGG TTCGTCCGAG GCGTGCATGC TGGGTGGTCT GGCGCTCAAG
CGACGCTGGC AGCACGCGCG TCGCAGCGCC GGCCAGTCCA CGGATCGCCC CAATCTGGTG
ATGTCGAGCG CGGTGCAGGT GTGTTGGAAG AAGTTCTGCA ACTACTGGGA CGTCGAGGCC
CGAACCGTGC CGATCTCCGA GGAGCGCAGG GTGCTCGACG GCCACGACCT TCGGTCGTAT
GTGGACGAGA ACACCATCGG TGTCGTGGCG CTCCTGGGTG TGACGTACAC CGGGATGTAC
GAGCCGGTCG AACGGATCGC GGCGGCACTG GACGATATCC AGGCGGCGAC CGGATGGGAC
ATCCCCATTC ACGTCGACGG AGCTACGGGT GCATTCATAG CGCCGTTTAT CCAACCTGAC
CTGGTCTGGG ACTTCCGTAT CGGGAGGGTG GCTTCGATCA ATGCATCGGG ACACAAGTAC
GGCCTGGTCT ACCCGGGCCT GGGGTGGATT GTCTGGCGAG ATCAGGTGGC ACTGCCCGAT
GACCTGAGAT TCCGGGTAGC CTACCTGGGG GGCGATACAC CAACGGTCGG GTTGAGTTTC
ACCCGGCCGG GATCCCATGT GCTACTGCAG TACTACCTCT TCCTGCGCCT CGGCCGGGAC
GGTTTTCGGC GAGTGCAGCA GGCCACGCAC GACGTCGCAC AGTACCTGTC CCGGGAGATC
GCAGCAATGC CGCAGTTCGA GTTGTGGAGT GATGGCAGCG ACATTCCGGT GCTGACGTGG
CATCTCCGGA AGGGGCCTTC CTGGAACTGG AACCTGTACC ACCTGTCCGA TCGACTGCGC
ATGAAGGGGT GGAAGGTTCC CACGTACCCG ATGCCCGAGG ACCTGACGGA CCTCACCGTA
CAACGGATCG TGGTCCGTAA CGGGCTCAGT CGCGATCTCG CCGGGGTCTT CATCGCCGAC
CTCCACGCGG AGGTAGCGTT TCTCGAATCC CTTACCGTTC CTATCACGAC TTTGGGTCAG
CGACCCGGGT TCCATCATTG A
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| Protein sequence | MPNTRRSIDS FGPGVVGLNP MFARPGEATE LARFSIPDDE SLPETAYQIV HDEVALDGNA
RLNLATFVGT WMDSHAEKLF AETFDKNLID KDEYQATDVI ETRCRTILAD LWHAPEPRNA
VGTSTIGSSE ACMLGGLALK RRWQHARRSA GQSTDRPNLV MSSAVQVCWK KFCNYWDVEA
RTVPISEERR VLDGHDLRSY VDENTIGVVA LLGVTYTGMY EPVERIAAAL DDIQAATGWD
IPIHVDGATG AFIAPFIQPD LVWDFRIGRV ASINASGHKY GLVYPGLGWI VWRDQVALPD
DLRFRVAYLG GDTPTVGLSF TRPGSHVLLQ YYLFLRLGRD GFRRVQQATH DVAQYLSREI
AAMPQFELWS DGSDIPVLTW HLRKGPSWNW NLYHLSDRLR MKGWKVPTYP MPEDLTDLTV
QRIVVRNGLS RDLAGVFIAD LHAEVAFLES LTVPITTLGQ RPGFHH
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