Gene Sare_2277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2277 
Symbol 
ID5706036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2614041 
End bp2614787 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content67% 
IMG OID641271756 
Producttwo component transcriptional regulator 
Protein accessionYP_001537127 
Protein GI159037874 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.113906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0109188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACCA ACGAGCAGGT GGGGCCGGCC CGGGTCGAGC TACGCCGTCC CGACGGCCAA 
CCCGTGCGTG TCCTGGTCGT CGACGACGAA CCCACCCTGA CCGACCTGTT GTCGATGGCG
CTGCGCTACG AGGGCTGGCA GGTGCGTACG GCGGGCAACG GGATGGCGGC GCTGAGCACG
GCCCGCCAGT TCCAGCCGGA CGCGGTGGTG CTCGACGTGA TGCTGCCAGA CCTGGACGGC
TTCGCGGTGC TGCGTCGCCT GCGCGAGGTG GCTCCGACAG TGCCGGTGCT CTTCCTGACC
GCGCGGGACG CGGTCGAGGA CCGGGTCGCC GGGTTGACCG TCGGCGGCGA CGACTACGTG
ACCAAGCCGT TCAGTCTGGA GGAGGTGATC GCCCGACTGC GGGCACTGCT GCGCCGCTCC
GGCTTCGCGA TCGCCGCCCG GCACGAGGCG GTCCTCACCG TCGGTGACCT CTCCCTCGAC
GAGGACAGCC ACGAGGTGAG TCGGGACGGT CAGTTGATCA ACCTGACTGC CACCGAGTTC
GAACTGCTGC GTTACCTCAT GCGTAATCCG CGGCGGGTGC TCAGCAAGGC CCAGATCTTG
GACCGGGTCT GGAACTATGA CTTCGGCGGT CAGGCCAATG TGGTCGAGCT GTACATCTCG
TACCTACGAA AGAAGATCGA CGCCGGTCGC GCGCCGATGA TCCACACTCT GCGCGGGGCG
GGCTATGTCC TCAAGCCCGT CGACTGA
 
Protein sequence
MMTNEQVGPA RVELRRPDGQ PVRVLVVDDE PTLTDLLSMA LRYEGWQVRT AGNGMAALST 
ARQFQPDAVV LDVMLPDLDG FAVLRRLREV APTVPVLFLT ARDAVEDRVA GLTVGGDDYV
TKPFSLEEVI ARLRALLRRS GFAIAARHEA VLTVGDLSLD EDSHEVSRDG QLINLTATEF
ELLRYLMRNP RRVLSKAQIL DRVWNYDFGG QANVVELYIS YLRKKIDAGR APMIHTLRGA
GYVLKPVD