Gene Sare_2200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2200 
Symbol 
ID5708195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2533505 
End bp2534428 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content72% 
IMG OID641271681 
Producthomocysteine S-methyltransferase 
Protein accessionYP_001537052 
Protein GI159037799 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2040] Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.558388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.514236 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCGAC GTAGTGGGTC TCGCCCGCTG ATCCTCGATG GCGGGCTCGG CACCGAGTTG 
CAACGACGGG GTCGGTCGGT CACCGCGCCC TGGTGGACCG CCCACTGCCT GCGGGACGCC
GACGGGCGGC GGCTCATCGC CCAAATCCAC GCCGAGTACG TGACCGCGGG CGCGGATGTG
ATCACCGCAG ACACGTTCCG CACCACCCCA CGGGCTGCCC ACCGGGCCGG GATCGCGGGC
CACACCGTCG CCGCGGATCT CGTACGCACC GCGGTGGCGT TGGCTCGGGA GGCCGCGGAC
ACGGTACGAC GGCGGGTACT CGTCGCCGGC TCGGTTGCCC CGGTCGAGGA CTGCTACCGG
CCAGACCTGG TACCGAACGA CGGTGTACTG CGCCGCGAGC ACGCCTGGCT GGCCGAGCAG
CTCGCCCGGA CAAGCGTGGA CCTGGTGCTG GTGGAGACCA TGAACACAGC CCGGGAGGCG
GTCGCTGCCA CCCGGGCAGT TTGCGCGGAG GGCCTGCCCG CCTGGGTCAG CTTTGTCTGC
ACCAACGACG CACGGCTACT GTCCGGTACG GACGTGGTCG CCGCGGCCGC CGCGGTACGG
GCCGCCGGGG CCGACATGGT CCTGGTCAAC TGCACCGATC CCGCCGGAAC CGACGGGGCG
TTGCGCCGGC TTCGACGACC CGACGTTGGT CCGCTCGGCG CGTATCCGAA CCTGGAGGAT
CGCAGGGGCC TGCCCCCCGC CGCCGCCGTG GATCGGTACC TGCCGCCGAG GCTGACACCG
GACGCTTTCG CCGAGCTGTG TGCCGGCTGG TACTACCTCG ACGTGGTCGG CGGCTGCTGT
GGTTCCACTC CGACGCACAT CGCCACGCTG CGTGGCCGGT TCCCGGTTGA CGACCGTGGT
GTCCGCCCCC GGGAGTCCGG CTGA
 
Protein sequence
MDRRSGSRPL ILDGGLGTEL QRRGRSVTAP WWTAHCLRDA DGRRLIAQIH AEYVTAGADV 
ITADTFRTTP RAAHRAGIAG HTVAADLVRT AVALAREAAD TVRRRVLVAG SVAPVEDCYR
PDLVPNDGVL RREHAWLAEQ LARTSVDLVL VETMNTAREA VAATRAVCAE GLPAWVSFVC
TNDARLLSGT DVVAAAAAVR AAGADMVLVN CTDPAGTDGA LRRLRRPDVG PLGAYPNLED
RRGLPPAAAV DRYLPPRLTP DAFAELCAGW YYLDVVGGCC GSTPTHIATL RGRFPVDDRG
VRPRESG