Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2122 |
Symbol | |
ID | 5704748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 2444790 |
End bp | 2446097 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641271607 |
Product | SufS subfamily cysteine desulfurase |
Protein accession | YP_001536978 |
Protein GI | 159037725 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0104519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0677 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCGGA CCGCACCGAC CCAGGAGGGT GGCTCGTTGA CCCGGCCCGA CCCCGCGCCA CCGGGGTCCG AGATCGGCCG GCTCCGGGCC GACTTTCCGA TCTTCGGTAG GCGGGTGCAC GGTCACCCGC TGGTGTATTT GGACTCGGCC AGTACCTCCC AGATACCGCT ACCGGTACTC GACCGGATGC GGCGGCACGA ACAGTGGCAC AACGGGAACG TGGGCCGTGC CGTCCACACC CTGGGTAGCG AGGCCACCGA GGCGTACGAG GAGGCCCGCG CCAAGCTCGC CGCGTTCATC GACGCCCGGT CGCCCGATGA GATCGTGTTC ACCCGTAACA CCACCGAGGC GATCAACCTG GTGGCACACG CGTTCGGCGG CGCGGGCGGC GGTGACCAGC GGTTCCGCCT GGGCCCCGGC GACGAGATAG TGGTCTCGGA GATGGAGCAT CACTCCAACC TCGTGCCGTG GCAGTTGCTG TGTCAGCGCA CCGGCGCCAC GCTCCGCTGG ATCGGACTCA CCGACGACGG CCGCCTGGAC CTGTCCGGCC TCGATGAGCT GATCAACGAG CGCACCCGAC TGGTGTCGTA CGTGCACGTC TCGAACATCC TCGGCACGGT CAACCCCACC CGGCCGATCG TCGACCGCGC TCGTGCCGTC GGTGCGATCA CCATGTTGGA TGCCTCCCAG TCCGTGCCGC ACATGCCCGT TGACGTCGCC GCCCTGGATG TCGACTTCGT GGCCTTCACC GGGCACAAGA TGTGCGGCCC GACTGGCATC GGCGCACTGT GGGGCCGGGC TGACCTACTG GAGGTGATGC CGCCGTTCCT GGCCGGAGGC GGCATGGTCG GGACGGTGTC GATGGAGGGC ACGGCCTTCG TGCCGCCGCC GGCCCGGTTC GAGGCGGGCA CACCGGCGAT CACCCCGGCG GTCGGGCTCG GCGCCGCGGT GGACTACCTG TCAGCGGTGG GTATGGCCGC GGTGCACCGC CACGAACAGC AGCTCACGGC GTATGCGCTG GCCGCGCTCG CCGAGGTGCC GGGGCTGCGG GTATTCGGTC CGACCGATCC GGCGCACCGC GGCGGTACGA TCTCCTTCGC CGTGCAGGGG GTGGACCCGA CCGTTGTCGG GCGACAGCTC GACGCGGTCG GGGTGCAGGT GCGCGTCGGC CGGCACTGCG CTGGGCCGGT GTGTGCCCGG TACGGCGTAC CAGCCATGGC CCGGGCCTCC TTCTACCTGT ACACGACGAC GGACGACGTC GACGCGCTGG TCACGGCCCT CGCGGACATC CGCCGGCGGT TCGGGTAG
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Protein sequence | MNRTAPTQEG GSLTRPDPAP PGSEIGRLRA DFPIFGRRVH GHPLVYLDSA STSQIPLPVL DRMRRHEQWH NGNVGRAVHT LGSEATEAYE EARAKLAAFI DARSPDEIVF TRNTTEAINL VAHAFGGAGG GDQRFRLGPG DEIVVSEMEH HSNLVPWQLL CQRTGATLRW IGLTDDGRLD LSGLDELINE RTRLVSYVHV SNILGTVNPT RPIVDRARAV GAITMLDASQ SVPHMPVDVA ALDVDFVAFT GHKMCGPTGI GALWGRADLL EVMPPFLAGG GMVGTVSMEG TAFVPPPARF EAGTPAITPA VGLGAAVDYL SAVGMAAVHR HEQQLTAYAL AALAEVPGLR VFGPTDPAHR GGTISFAVQG VDPTVVGRQL DAVGVQVRVG RHCAGPVCAR YGVPAMARAS FYLYTTTDDV DALVTALADI RRRFG
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